Protein

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Genbank accession
AXF39337.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRIRFRFRRPDASHVSGVPVDGVISCNPTMRVVQEDESLLLPVPFAVRLPSDGGDLTLDLKPTGVDWCWRIEERIKGLTHVRRVIVPDSTQILDYATLSEAAWHGASDNHGGLAHSIRTYPHVIRLGDVVDVDGLRPPDHVSAGDSVVDAEGHLWIVSRFDGGKVTFGIDGGVSLRGPKGERGLSFRSGMGVPDATTQGIVGDTYVDLTTGAVYRCQA
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23706,49360 Da
isoelectric point:5,87104
aromaticity:0,06393
hydropathy:-0,14886

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bifidobacterium phage PMBT6
[NCBI] 		2576879 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bifidobacterium thermophilum
[NCBI] 		33905 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Bifidobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF39337.1 [NCBI]
Genbank nucleotide accession
MH444512.1 [NCBI]
CDS location
range 32298 -> 32957
strand +
CDS
ATGACGAGGATACGATTCCGGTTCCGCAGGCCGGACGCATCGCACGTGTCCGGCGTGCCGGTGGATGGCGTCATATCCTGCAATCCGACGATGCGGGTCGTGCAGGAGGATGAGAGTCTGCTCCTGCCGGTGCCTTTCGCGGTGCGGTTGCCGTCCGATGGCGGTGATCTGACTCTTGACCTCAAGCCGACCGGCGTGGACTGGTGCTGGCGCATCGAGGAGCGGATCAAGGGGTTGACGCATGTGCGTCGCGTGATCGTCCCGGACAGCACGCAGATTTTGGATTATGCGACTCTTTCCGAGGCTGCATGGCATGGCGCGTCTGACAATCACGGTGGCTTGGCGCATAGCATCCGGACCTATCCGCATGTCATCCGGCTTGGCGATGTGGTGGATGTGGACGGTTTGCGTCCACCTGACCATGTGTCCGCTGGAGATTCGGTCGTGGATGCAGAAGGGCATTTGTGGATCGTCAGCCGTTTCGATGGCGGGAAGGTGACTTTCGGCATTGATGGTGGTGTGAGCCTGCGCGGGCCGAAAGGGGAGCGTGGGCTGAGTTTCCGCAGTGGCATGGGCGTGCCGGATGCGACCACTCAGGGAATTGTGGGTGACACTTACGTTGACTTGACGACTGGTGCCGTGTACCGGTGTCAAGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
302f7ff36830af44ff107de8ca4e3eec343146cfbab5c7626a94726cc55b253a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7646
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of the temperate bacteriophage PMBT6 residing in the genome of Bifidobacterium thermophilum MBT94004 Sprotte,S., Bockelmann,W., Brinks,E., Schleifenbaum,P., Cho,G.-S., Fiedler,G., Heller,K.J., Franz,C.M.A.P. and Neve,H. 2020 — GenBank