Protein

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UniProt accession
A0A8S5LIT8 [UniProt]
Protein name
Leucine-rich repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,59
Protein sequence
MEQKSSKQRAEEAVLDLKGKLRQLNKTLASKGATIEENAPLVDTIKAVEGMKEQAVTMSIFKRQQFFGYVDESLPPLRISERYNPALIDYCFAQNRALKNLPSIENIGVAVNLSSFASSCGSLIEVSLGALTNATNISKAFESCSALTRATIGDAPKVTDASFMFSGCNKLEEVSIDLSGGLLTNFAFAFSNCSSLRRVTGAIDLSNANSPTAPFNGCSSLEEVRIKGLKVDLDLSACANLSVESVRYLVENAQNVTGKRIDLSRALLDANEEALGDLGDTASDKGWTINYR
Physico‐chemical
properties
protein length:292 AA
molecular weight: 31441,25040 Da
isoelectric point:5,20198
aromaticity:0,06164
hydropathy:-0,11815

Domains

Domains [InterPro]
DC_0103
RBD
3–287
DC_0103
Coil
Unmapped
7–27
Coil IPR032675
SSF52058
STR
84–246
SSF52058
IPR026906
STR
139–247
IPR026906
A0A8S5LIT8
1 292
Architecture
RBD
STR
RBD
RBD 3-70 | STR 71-270 | RBD 271-287 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctfYP22
[NCBI] 		2827584 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD69768.1 [NCBI]
Genbank nucleotide accession
BK015856 [NCBI]
CDS location
range 34641 -> 35519
strand +
CDS
ATGGAACAGAAGAGCAGTAAGCAACGAGCCGAGGAGGCGGTGCTCGACCTCAAGGGCAAGCTCCGACAGCTCAACAAGACGCTCGCAAGCAAGGGCGCTACGATAGAAGAGAATGCCCCGCTGGTAGACACGATTAAGGCGGTGGAGGGGATGAAGGAGCAGGCTGTAACAATGTCCATCTTTAAACGCCAGCAATTTTTTGGATATGTTGATGAGTCGCTTCCTCCTCTGAGGATTTCAGAAAGATACAATCCAGCACTCATTGATTATTGCTTCGCCCAAAACAGGGCGTTGAAAAATCTCCCGAGCATTGAGAATATTGGTGTGGCGGTCAATCTGTCGTCGTTCGCATCTTCGTGCGGATCTCTCATAGAGGTATCGCTGGGAGCACTCACAAATGCGACCAATATCTCTAAAGCCTTTGAGTCTTGCTCCGCCCTTACACGTGCGACTATCGGAGATGCGCCAAAGGTGACAGATGCCTCTTTCATGTTCTCGGGTTGCAATAAGCTCGAAGAGGTCTCAATAGACCTCTCGGGAGGTCTACTGACCAATTTCGCCTTCGCATTTAGCAACTGCTCAAGCCTCCGTAGAGTTACTGGGGCTATCGACTTGTCAAATGCCAATTCGCCTACTGCTCCATTTAATGGATGCTCGTCGCTCGAGGAGGTGCGCATCAAGGGTCTCAAGGTTGATCTCGACCTCTCCGCGTGCGCTAACCTCTCCGTAGAGAGCGTGCGCTACCTCGTTGAGAACGCACAGAACGTAACGGGCAAGCGCATCGACCTAAGCCGTGCACTCCTCGACGCAAATGAGGAGGCACTCGGAGATCTCGGAGATACGGCCAGCGACAAGGGCTGGACAATTAACTATAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c930c1e192cb726d471ac4932061601c0117e36493a6e706632a541b0b370dad
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9226
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50