Protein

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Genbank accession
WVO01528.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGDGTLVNKNTWVKCPIENIKDIYVGVDCTLIITENNKVFFTGYRASLGASSGYLNTFTDITSTFNNFDLNKAKLMFGSRGLFLLQDEQLYAIGQGTYASNNIYGNVGLGATSSSSFKRVASGVKEIYSSLSSSSDASFYISTTGELFGTGRNLYGTLGLGFASEQPTFYKVPFTLPIKTINLSSMNVLITTENNEVYMSGNRSNGLCADGSSASAYYTTLTKNTLIDSELASKFVQYTNSFCSEGAIYLCTSESIYSSGSDYYGRFGIGNTSTIIYSTLVQNGFLQDIIFDPTHVVQGGYYVYYWHENTVYAVGNSRWIPGSTEDFTKWNKVPMQPRII
Physico‐chemical
properties
protein length:340 AA
molecular weight: 37346,30610 Da
isoelectric point:5,29128
aromaticity:0,13824
hydropathy:-0,11059

Domains

Domains [InterPro]
IPR009091
STR
2–303
IPR009091
IPR009091
STR
8–338
IPR009091
IPR051210
Unmapped
18–212
IPR051210
WVO01528.1
1 340
Architecture
STR
STR 2-338 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01528.1
1 340
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,2011
Central domain 69 291 224 0,4374
C-terminal 292 340 48 0,6464
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-291
C-terminal
292-340

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01528.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 48059 -> 49081
strand -
CDS
TTGGGGGATGGTACATTAGTAAACAAAAATACATGGGTTAAATGTCCAATAGAAAATATTAAAGATATATATGTTGGCGTTGACTGTACTTTAATTATTACTGAAAATAATAAAGTGTTTTTTACTGGTTATAGGGCATCATTGGGTGCATCATCTGGATATTTAAATACATTTACTGACATAACATCCACTTTCAATAACTTTGATTTAAACAAAGCTAAATTAATGTTTGGGAGTAGGGGATTATTTTTATTACAAGATGAACAGCTTTATGCTATTGGTCAAGGGACATATGCCTCGAATAATATCTATGGTAATGTTGGTTTAGGTGCTACTTCTTCATCATCATTTAAACGTGTAGCTAGCGGAGTAAAAGAAATTTATAGTTCATTAAGTTCATCAAGTGATGCATCATTTTATATTAGTACAACAGGGGAACTTTTTGGTACTGGAAGAAATTTATATGGAACTTTAGGTCTAGGGTTTGCTAGTGAGCAACCTACATTCTATAAAGTTCCGTTTACATTACCCATCAAAACTATTAATTTGAGTTCGATGAATGTTTTGATTACTACAGAAAATAATGAAGTATATATGAGTGGTAACCGTAGTAATGGTTTATGTGCTGATGGTTCATCTGCATCTGCATATTATACAACACTAACAAAAAATACGTTAATTGATTCTGAATTAGCCAGTAAATTTGTTCAGTACACAAATAGTTTTTGCAGTGAAGGAGCAATTTATCTTTGTACTTCAGAATCTATATATAGTTCTGGTTCTGATTACTATGGTAGATTTGGAATAGGTAATACATCAACAATAATATATTCAACCTTAGTGCAAAATGGTTTTCTTCAAGATATTATCTTCGATCCAACACATGTTGTTCAAGGTGGTTATTACGTGTATTATTGGCATGAAAATACGGTATATGCAGTGGGTAATTCAAGATGGATACCGGGGTCAACTGAAGATTTTACCAAATGGAATAAAGTTCCAATGCAACCAAGAATAATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
59aa6834301ea226b95f3ed6bbdfc171baa542de37014c7987dccbdaafe58def
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank