Protein

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Genbank accession
YP_011108971.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MALKTKIIVQQILNIDDTTTTASKYPKYTVVLGTSISSITASELTGAVEASAASAAAAKDSEIAAKESETNAKDSENLAAIYANSSETSATQSAASATEAERQAGLSKDSADASATSAEESKGFRDSAELAAQNAEQSRLLAEQAKKDAEAAKTAAATSEQNAATSATESTNQAIAAAGSATEAGEYATTAKDSEIAAKTSELNAKNSENESAISAEASEASASQSAISASQSAASATKAAESSAAAKISETTAIESSAAAKTSEINAKTSETNAKTSETNAAAYAAAAKTSETNAADSAASASDSKGFRDEAEAFAAQASTSALAAKNSETNTKTSEINSKASEDAAKLAQQSASGSANTATQAMTTTKGYRDEAEVFKNTATTAATTATDKALEAAGSATIAGEKATNATSAADRAETAAASAEQVMQASLKKDQNLNDLANKDLAREALKVEAVNSVKDQYAGAYNSFRNPAWTYELRIANNGEWRVARNDNNSTSALSIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGSNSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAIIIPNNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHGKNANGRVEYGNIVATAMNGNKWGIICSAGSWGGWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDRDGHISAFADSARIFAWTPSGINTYRVISSYVDDNARGMYVNGVRRGDPNALIAGQVEGGSFADWRSRASGLLVEHTGFDSAVAIFKSVYWGKDWIAGMDVVPWTSGGAETHLYVKGAEFIFDSAGNGSASNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNNDGQLDPKGEAIKGINYNGVVALLVNAFKEQKAKIDNQQEEINVLRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:983 AA
molecular weight: 103228,57000 Da
isoelectric point:4,82707
aromaticity:0,06409
hydropathy:-0,43093

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0415 DC_1205 DC_0971
Coil
Unmapped
132–162
Coil IPR030392
IPR030392
CHP
849–909
IPR030392 Coil
YP_011108971.1
1 983
Architecture
ATT
STR
STR
RBD
ATT 2-192 | STR 252-500 | STR 524-701 | RBD 703-983
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_011108971.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 366 366 0,7370
Central domain 367 565 200 0,5138
C-terminal 566 983 417 0,7153
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-366
Central
367-565
C-terminal
566-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BD13
[NCBI] 		2912287 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus BD13
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011108971.1 [NCBI]
Genbank nucleotide accession
NC_092681 [NCBI]
CDS location
range 34663 -> 37614
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACACTACAACTACTGCTAGTAAATATCCTAAGTATACGGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGTGAACTAACAGGGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCGGAGAACCTAGCTGCAATTTACGCTAACTCTTCAGAAACTTCTGCAACTCAATCTGCTGCTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACGTCAGCTGAGGAATCCAAAGGATTCCGTGATTCTGCTGAACTTGCTGCACAAAATGCTGAACAGAGTCGTCTATTAGCTGAACAAGCTAAGAAGGACGCTGAGGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTACATCTGCTACTGAGTCTACCAATCAGGCTATTGCTGCTGCTGGTTCTGCTACAGAGGCGGGAGAATACGCTACTACTGCAAAAGACTCCGAGATAGCTGCTAAGACTTCAGAACTTAATGCTAAGAATTCTGAGAATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAGTCTGCTATTTCTGCTTCTCAATCTGCTGCATCCGCTACTAAAGCTGCAGAATCATCAGCTGCAGCAAAAATTAGTGAAACTACTGCTATAGAATCATCAGCTGCAGCAAAAACTAGTGAGATTAATGCAAAAACTAGTGAGACTAATGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGTGAGACTAATGCTGCTGATTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAACTAATACAAAGACTAGTGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAAGTGCATCAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGTATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCCGCTGGTAGCGCTACAATAGCAGGAGAGAAAGCTACTAATGCCACCAGTGCAGCAGATAGAGCGGAGACAGCGGCTGCATCAGCAGAACAGGTTATGCAAGCGTCGTTAAAGAAGGATCAGAATCTTAATGATCTTGCAAACAAAGACCTTGCAAGGGAGGCGCTAAAAGTTGAGGCTGTTAATTCTGTAAAAGATCAATATGCTGGCGCTTATAATTCTTTTCGTAATCCTGCATGGACTTATGAATTACGGATCGCTAACAATGGGGAATGGCGCGTTGCGCGTAATGACAATAACAGCACATCTGCGCTTTCTATTGGTGCTGGCGGTACTGGTGCTGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTATGCACCAGGGAGTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGAGCAAGAAAGAACTTAAATACTCCTGTTGGTGGTCAAGCAATTATTATTCCTAATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACGGTAAAAATGCAAACGGTCGTGTTGAGTATGGAAATATTGTTGCAACCGCAATGAACGGTAATAAATGGGGTATCATTTGCAGTGCTGGCTCTTGGGGTGGATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCGGATGCTCAATCGGCTCTTGGTGATTACTCTATAGCAATTGGGGATCATGATTCAGGTCTTAAATGGGATCGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGAATAAACACTTACAGGGTCATATCATCTTATGTTGATGATAACGCAAGGGGTATGTATGTAAATGGAGTTAGGCGCGGTGATCCAAATGCTCTTATTGCTGGTCAAGTTGAGGGTGGTTCATTTGCCGACTGGCGTAGTCGTGCGTCTGGATTGCTTGTTGAGCACACTGGATTTGATTCTGCGGTTGCCATATTTAAATCTGTTTATTGGGGGAAAGATTGGATAGCTGGCATGGATGTTGTTCCGTGGACTTCTGGCGGCGCTGAAACACATCTTTATGTTAAGGGCGCTGAATTTATTTTTGATAGTGCTGGAAATGGTAGCGCATCAAATTGGGTTAGCAGGTCTGACATTAGATTAAAAGCACATCTAAAAGAGATCGAAACGGCATCCGACAAAATTGATTATCTAACTGGTTATACTTACTACAAGCGCAACAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATCGCACAAGATGTTGAAAGGGTTTTGCCGGAAGCGGTTCATTCTTTGAATAACGATGGTCAGCTAGACCCAAAAGGCGAGGCAATCAAAGGCATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGCAAAGATTGATAATCAACAGGAGGAAATTAACGTATTACGCAATGAGTTATATGAACTGAAAAATCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b6eeef37407f48b7adca17e18716c5d6984ad85862c4f2ed0f17e0910d5d6fe1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5889
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50