Protein

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Genbank accession
AFD02649.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVTKIRETQVSTDTQLVVTSLQFQNTTSILKLPTGTTANQPGSPAVGMIRFNTDIDRAETYVADVDGDGNAGWLEVGSGGGTVYGDNGEIRSNTNRILKSIEVPDTTTDPNSSNAFIKGPVTILSDNATPAVVDLGTGVTLTVW
Physico‐chemical
properties
protein length:145 AA
molecular weight: 15201,65360 Da
isoelectric point:4,30399
aromaticity:0,04828
hydropathy:-0,17586

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-MbCM6
[NCBI] 		3126011 Uroviricota > Caudoviricetes > Pantevenvirales > Namakavirus > Namakavirus smbcm6
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFD02649.1 [NCBI]
Genbank nucleotide accession
JN371768.1 [NCBI]
CDS location
range 28914 -> 29351
strand +
CDS
ATGGCAGTCACTAAGATCAGAGAGACGCAAGTCTCAACAGATACTCAATTAGTTGTAACTAGTTTGCAGTTTCAAAATACAACTAGTATTCTAAAACTTCCCACTGGTACCACTGCTAATCAACCAGGATCTCCTGCCGTTGGTATGATTCGTTTTAATACTGATATTGATAGGGCAGAAACATATGTTGCTGATGTTGATGGTGATGGAAATGCTGGTTGGTTAGAGGTTGGATCTGGTGGCGGCACTGTTTATGGTGACAATGGCGAAATTAGATCTAATACAAATAGAATTTTGAAAAGTATTGAAGTTCCTGACACAACAACGGATCCCAATTCTTCCAATGCATTCATTAAAGGACCAGTCACAATTCTCTCTGATAATGCAACTCCAGCAGTTGTAGATCTGGGAACGGGTGTAACTTTAACAGTTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
80b97a12f895d383d8bd25f63cb855ac07f8cf05517734ef003056184b2aac98
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5346
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Viral tagging reveals discrete populations in Synechococcus viral genome sequence space Deng,L., Ignacio-Espinoza,J.C., Gregory,A.C., Poulos,B.T., Weitz,J.S., Hugenholtz,P. and Sullivan,M.B. 7517 25043051 GenBank