Protein

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Genbank accession
AUR87974.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDLDNAINSINASAAKAENTATFLDDMSTFDDQSSVTNPNNGQTVASIPKQVKDRTDELFTASESDINQAVSDAAQSATDAQDAADSIGRYQGLWPDTGGSASKGDTYQTQVGGAPTGQYFTALQNTTVDPIGDDVNWRKVVSFSSIIGDNLISNASFEISGGVTNPPDAVSRDYVAGDELFQGVFAASNLTGVTYADGLLNGTGQLYTDVHKSEKQKESTANHVASIASSNGVPTQAGVSLIDSGDYWRVTFDMSDTFSIKLEDGGTPTKHAHSVSTGDIYNIQRSVNSNGLYASYFGIYGDGTDEGDRLQSALQYCSDNNLNFLGGNLTINHSETLTIYLSESFTDSGLGIKGAKRNGLTFNFTHTGTAKPQIVFDTRTSGATGYDLDIKNLQLTSSTDSLGIVTKCIANNFRWDNLDVNGSSDAIRFESFTWGSKFTNIYMRPDQNGFLMKVSGTSNYFDQLRVFGCNTLCYDIRCNYSTIGTLVGESSSGVIFRLNFFHGSVGALGYERASTLFSPTAILDSVNSDADIGLLYVLDFNDSASDFRVIQSSGNDRSRCKSIFISNTSGTSTVAGNLIRNISGNFEIGTVRSNVNFTPYAVNGGPNTSLVSGHGMGSQVAYLRGTQRPYVGPSPEYVDIGLVSVVGNSINLDCEGSPGTASDGSSRQFEPAPAQGDWWIENDPASNAVAGYSTLTKGANVGGSTYAPIPLVLFGVFSSRPTAAPVGTCYFATDRDGAGASGRGIPVWKANSVDWVDATGLLIT
Physico‐chemical
properties
protein length:766 AA
molecular weight: 81211,86620 Da
isoelectric point:4,49411
aromaticity:0,09399
hydropathy:-0,25966

Domains

Domains [InterPro]
Coil
Unmapped
1–21
Coil
DC_0090
STR
1–759
DC_0090
AUR87974.1
1 766
Architecture
STR
STR 1-759 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87974.1
1 766
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,8010
Central domain 309 601 294 0,9888
C-terminal 602 766 164 0,8846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-601
C-terminal
602-766

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.106.O._10N.286.51.F7
[NCBI] 		1881248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87974.1 [NCBI]
Genbank nucleotide accession
MG592478 [NCBI]
CDS location
range 29507 -> 31807
strand +
CDS
ATGAGCGATTTAGACAACGCTATAAATTCAATTAACGCATCAGCAGCTAAGGCAGAAAATACCGCTACCTTTCTGGATGACATGTCTACGTTTGACGATCAATCAAGCGTAACCAACCCAAACAACGGGCAAACTGTTGCGTCTATTCCTAAGCAAGTAAAAGATCGCACAGATGAGCTATTCACCGCTTCTGAGTCGGATATCAACCAAGCGGTATCTGACGCAGCACAAAGCGCAACAGATGCACAAGATGCTGCGGATAGTATCGGACGCTATCAAGGTTTATGGCCCGACACAGGCGGCAGCGCTAGCAAAGGCGACACTTATCAAACTCAAGTTGGCGGTGCGCCTACAGGTCAGTATTTCACAGCTTTGCAAAACACAACAGTCGATCCGATTGGTGATGATGTTAATTGGCGCAAGGTTGTTTCATTTTCATCAATTATTGGTGATAACTTAATATCGAACGCATCATTTGAAATTTCAGGTGGCGTAACCAACCCGCCAGACGCAGTATCTAGAGATTACGTTGCTGGTGATGAGTTATTTCAGGGTGTATTTGCAGCTAGTAACTTGACTGGAGTAACTTATGCTGATGGGCTTTTAAATGGTACAGGCCAGCTTTACACGGATGTACACAAATCAGAAAAGCAAAAAGAATCAACTGCAAACCATGTAGCGAGTATCGCATCTAGTAATGGAGTTCCGACCCAGGCGGGAGTGTCACTTATTGATAGTGGTGATTACTGGCGTGTAACCTTTGATATGAGTGATACTTTTTCTATTAAGCTGGAGGATGGTGGCACGCCAACTAAGCACGCCCATTCGGTATCAACGGGCGACATATATAACATCCAAAGGTCTGTGAATAGTAATGGGCTATACGCTTCATATTTCGGAATTTACGGCGACGGAACTGATGAAGGCGACAGACTGCAAAGCGCACTCCAATACTGCTCAGATAATAACTTAAACTTTCTAGGCGGCAATCTAACGATAAATCACTCTGAAACCCTGACTATCTACTTATCAGAATCATTTACAGATTCAGGTCTTGGTATTAAAGGCGCAAAGAGAAATGGGTTAACTTTTAACTTTACGCATACCGGAACAGCAAAGCCACAGATAGTCTTCGACACCAGGACAAGTGGCGCAACAGGGTATGACCTAGACATAAAAAACCTTCAACTAACTTCAAGTACTGACTCGCTCGGTATTGTTACAAAATGTATTGCAAACAACTTTAGATGGGACAACCTAGACGTTAATGGGTCGTCGGATGCTATTAGATTTGAGAGTTTTACTTGGGGCTCTAAGTTTACAAATATATACATGAGACCAGACCAGAATGGATTTTTGATGAAGGTGTCAGGCACATCAAACTATTTCGACCAGTTAAGGGTGTTCGGGTGTAACACTCTTTGCTACGACATTCGATGTAACTATTCTACCATCGGTACATTGGTCGGCGAATCTTCAAGTGGCGTCATATTCAGACTAAACTTTTTCCACGGCTCTGTTGGAGCGCTGGGGTACGAAAGGGCCAGTACGTTATTCTCGCCTACCGCGATACTTGATAGCGTAAACTCAGACGCAGATATTGGGCTCTTATATGTTCTTGATTTTAATGACTCCGCTTCTGACTTCAGAGTAATACAGTCAAGCGGGAATGATAGATCTAGGTGTAAATCAATTTTCATTTCTAACACGTCGGGAACTAGCACGGTCGCGGGGAATTTAATCAGGAACATATCTGGAAACTTTGAGATCGGTACAGTAAGGAGCAATGTAAACTTCACTCCTTACGCAGTTAACGGAGGCCCGAATACGTCACTCGTTAGCGGTCATGGGATGGGATCTCAAGTGGCCTATCTTCGAGGGACGCAAAGACCGTATGTCGGACCAAGTCCTGAGTATGTTGATATTGGCTTGGTTTCAGTAGTTGGAAATTCTATTAATCTAGACTGTGAAGGCTCACCGGGCACAGCTAGCGATGGTTCAAGTAGGCAATTCGAACCAGCCCCAGCGCAAGGCGACTGGTGGATTGAAAACGACCCAGCATCAAACGCTGTCGCTGGATACTCGACCCTTACCAAGGGGGCAAATGTCGGAGGCTCAACATACGCGCCAATACCTTTAGTTCTGTTCGGAGTGTTTTCAAGTCGGCCAACCGCAGCCCCTGTTGGAACTTGCTACTTCGCAACAGACAGGGATGGAGCTGGAGCGAGCGGGAGAGGGATACCGGTCTGGAAAGCAAATAGCGTAGATTGGGTAGACGCTACCGGATTACTAATTACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d4884d0211b061f760cbb87bf881be78e763fa34cd1db473b87b0c2f1ffe004
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank