Protein

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Genbank accession
AGG58128.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFFENSPLISQSAPPAPESVLLMRASYVTPDANDLKQTLAADNTPETILFNDVPLASPDIDVDLVTGESTALKDFSGMVSINALVLRESSPFAASDWGMFAEVFDGSNWVPVSGSHRPLTLGFQFDNEKRPNDFTVSISLLAGDKFRWRHYTTDASSQVSLVSFGAANGLPSSAGVIMSFWGVKP
Physico‐chemical
properties
protein length:185 AA
molecular weight: 19951,14220 Da
isoelectric point:4,40834
aromaticity:0,10270
hydropathy:0,00000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage martha 12B12
[NCBI] 		573175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58128.1 [NCBI]
Genbank nucleotide accession
HQ316581.1 [NCBI]
CDS location
range 13531 -> 14088
strand -
CDS
ATGTTTTTTGAAAACTCACCACTGATAAGTCAAAGCGCACCGCCTGCACCTGAATCTGTTTTGCTTATGCGTGCCAGTTATGTCACGCCAGATGCGAACGATTTAAAACAAACGCTCGCGGCAGACAATACACCGGAAACGATTCTATTCAACGATGTGCCTTTGGCCTCTCCTGATATAGACGTTGACCTGGTGACTGGCGAATCAACCGCTTTAAAAGACTTTAGCGGCATGGTGAGTATCAATGCTTTGGTACTGCGTGAGAGTTCACCTTTTGCGGCCAGTGATTGGGGCATGTTTGCTGAGGTGTTTGATGGTAGCAATTGGGTTCCTGTTTCAGGTAGCCATCGACCGTTAACCCTTGGCTTTCAATTCGATAATGAAAAACGCCCGAATGACTTCACTGTTTCCATCTCTTTGCTTGCTGGCGACAAGTTCCGTTGGCGTCACTATACAACGGATGCAAGCAGCCAAGTGTCATTGGTTTCATTTGGCGCGGCTAATGGGTTGCCCTCTTCAGCGGGTGTGATTATGAGTTTCTGGGGCGTTAAACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
90ef596fbc5f28f5f590eda4698e962b5d1a59385108f38b39f9be8b933f079f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8432
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage martha 12B12 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank