Protein

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Genbank accession
YP_010100686.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MAVEGPWVGWSAVVNTGQNWMGGAAQRLRMGAPFWMSNMIGRSVEVIHTLGADHNFNGQWFRDRCFEAGGAPIVFNITGNLVSYTKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGSPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWPANSTAGGGGGRPFGLGGGGVNWPGGNASYDGPGGGGNTSQFGGGNGGDAGGAGGNGWGNNLSRSGGGAPGRAVFGSSPSWGATGTIYGSWL
Physico‐chemical
properties
protein length:257 AA
molecular weight: 25916,10150 Da
isoelectric point:6,89931
aromaticity:0,10895
hydropathy:-0,25720

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_2135
STR
1–140
DC_2135
YP_010100686.1
1 257
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-140 | RBD 141-257
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_005
[NCBI] 		2500761 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010100686.1 [NCBI]
Genbank nucleotide accession
NC_055783 [NCBI]
CDS location
range 148889 -> 149662
strand -
CDS
ATGGCAGTTGAAGGACCGTGGGTAGGATGGTCTGCAGTAGTTAATACAGGACAAAATTGGATGGGCGGCGCCGCCCAGCGATTGAGAATGGGCGCTCCGTTTTGGATGAGTAATATGATAGGCCGTTCTGTTGAGGTTATTCATACCCTTGGCGCAGACCATAACTTTAACGGTCAATGGTTTCGTGACCGTTGTTTTGAAGCCGGTGGTGCTCCTATAGTGTTTAATATCACAGGCAACTTAGTATCATATACTAAAGATGTTCCATTGTTCTTTATGTACGGTGATACCCCTAACGAATATGTTACTTTGAATATTCATGGTGGTGTTCATATGTGGGGCCGAGGTGGCAACGGTACAGTAAATGGAAGCCCAGGCACTAATGGTGGTGACGTAATCCAAAATGATATTGGTGGACGACTTCGCATTTGGAATTATGGTGTGATAGCCTCCGGTGGTGGTGGCGGTGGTGCCGTATCATTACAGAATAGTTGGCCTGCAAATTCTACAGCAGGTGGTGGAGGCGGTCGACCATTTGGTCTCGGCGGCGGTGGTGTTAATTGGCCAGGCGGCAATGCTAGTTATGATGGTCCAGGTGGCGGTGGTAATACAAGCCAATTTGGCGGTGGCAATGGCGGTGATGCTGGAGGCGCTGGTGGCAATGGATGGGGTAATAACTTATCCAGGTCGGGTGGTGGTGCTCCTGGTAGAGCGGTATTCGGAAGTTCTCCTTCATGGGGCGCTACAGGCACTATCTACGGCTCTTGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c8a80f2175f9649578e4d56960c1c92943492d46929db079f8f7d04cc94c3bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8418
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting Shigella spp. and E. coli O157: H7 Shahin,K., Bao,H. and Wang,R. 2020-06-17 — GenBank