Protein

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Genbank accession

CBY99572.1 [GenBank]

Protein name

Phi92_gp143

RBP type

TSP

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

TSP

Evidence RBPdetect2

Probability 0,94

Protein sequence

MSTTITNLPETSKVNSSDYLVLDQPDKTVKSTVSNFLADTGVVLATQLKDTSGATKYPELQMSRWRDEGDPRGWGAVGDGATDDTNAITQLLAAMPDGWIIDGRNLTFKVTTLPDISKFKNAAFVYERIVGQPLTYVSEGFFDGNLTKITDTPFYNAWTQDKTFVYDNVIYAPFMAGERHGVQNLHVAWVKSGDDGQTWSMPEWLTPIHPDYTADKVNYHCMSMGVCGNRLYAVIETRYLSNMRLKKAELWSRPMPYYRRPTGGITISSGSTTATIVLKKHGLKVGDAVNFSNSGATGVSGNMTVASVINKDTFTVTLARAATSNIDNTGTTWHFGTRFWDSPWEITELPDVAYSTNADLCVTETHSFTVIDDDNYTFAVGYHNGDISPRRLGILYFNNAYSDPSSFTRRTISQEYADNAAEPCIKYYDGILYLTTRGTSTSAAGSTLAMSADLGENWNYLRFPNNVHHTNLPFAKVGDYLYIFGTERSFGEWEGQELDNRYKGTYPRTFMCKINVSSWPVSLSNVQWFNITDQIYQGHIVNSACGVGSVCVKDGWLYYIFGGEDFLSPWSIGDNSKKLWYKHDGHPADLYSYRLKITEHDFVSRDFKYGATPNRTLPVSMGTDGVRHVSAPVTFDNDVQMYSLTVTGLEHDGTQQSAVRVKLDGDYGVIAKNIPIKNPSEQRLILCGGETPYTTDGSLLQLYGSNHTYPNRAILYAPGGAYTQNNFMPYLDGQVSLGGASNRWSEVYASTGTINTSDGTLKTKPTEIEDILLKAWEDIHVISYQWLSAVAEKGDSARIHFGVIAQDVRDILINYGLMDENSTDCKYAFLCYDEYPAMYDSVVTGQKEITLLDDEGNNVIDEEGNPVTIVEDVVETIEVIPAGSRWGIRADQMFFIEMAYQRKKLKALEERLATLESK

Physico‐chemical properties

protein length:	918 AA
molecular weight:	102379,20630 Da
isoelectric point:	5,03886
aromaticity:	0,11438
hydropathy:	-0,35490

Domains

Domains [InterPro]

DC_0079
ATT
1–39

DC_0079 G3DSA:3.30.750.60 G3DSA:2.120.10.10 IPR024430 IPR030392 G3DSA:3.30.2460.10 G3DSA:1.20.5.100

IPR036278
STR
75–603

IPR036278 SSF69349 cd10144

IPR024429
ENZ
76–142

IPR024429 IPR024428 IPR044914 IPR030392

IPR001724
Unmapped
144–168

IPR001724 IPR001724 IPR024427 IPR001724 IPR001724 IPR001724 IPR001724 IPR001724 G3DSA:1.20.5.1240 Coil

IPR023366
STR
259–339

IPR023366

IPR001724
Unmapped
330–353

IPR001724

CBY99572.1

1 918

Architecture

ATT

STR

CHP

RBD

CHP

RBD

ATT 1-39 | ATT 70-141 | STR 142-756 | CHP 757-769 | RBD 770-821 | CHP 822-888 | RBD 889-918

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0079	ATT	DC_0079	1	39	Novel HMM	DC_0079	N-terminal	Low	Positional only	38 proteins / 38 hits
G3DSA:3.30.750.60	ATT	G3DSA:3.30.750.60	70	141	Merged direct domain	G3DSA:3.30.750.60	N-terminal	Low	Positional only	2 proteins / 2 hits
IPR036278	STR	IPR036278	75	603	Merged direct domain	Sialidase superfamily	Central	Low	Positional only	56 proteins / 56 hits
IPR024429	ENZ	DC_0802	76	142	InterPro cluster	Endosialidase, N-terminal extension domain	N-terminal	High	Text match	84 proteins / 84 hits
G3DSA:2.120.10.10	STR	G3DSA:2.120.10.10	142	597	Merged direct domain	G3DSA:2.120.10.10	Central	Low	Positional only	42 proteins / 42 hits
IPR024428	ENZ	DC_0114	143	597	InterPro cluster	Endosialidase, beta-propeller domain	Central	High	Text match	92 proteins / 92 hits
IPR001724	Unmapped	-	144	168	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	211	239	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR024427	ENZ	DC_0382	256	338	InterPro cluster	Endosialidase, beta-barrel domain	Central	High	Text match	86 proteins / 86 hits
IPR023366	STR	IPR023366	259	339	Merged direct domain	ATP synthase subunit alpha, N-terminal domain-like superfamily	Central	Low	Positional only	44 proteins / 44 hits
IPR001724	Unmapped	-	330	353	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	409	435	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	487	513	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	545	569	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR024430	ENZ	DC_0521	600	756	InterPro cluster	Endosialidase, C-terminal domain	C-terminal	High	Text match	95 proteins / 95 hits
IPR044914	RBD	IPR044914	600	756	Merged direct domain	Endosialidase, C-terminal domain superfamily	C-terminal	Low	Positional only	39 proteins / 39 hits
SSF69349	STR	SSF69349	604	756	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR001724	Unmapped	-	649	675	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	681	708	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR030392	CHP	DC_0088	757	816	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
cd10144	CHP	DC_0088	757	904	InterPro cluster	cd10144	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	757	918	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
G3DSA:1.20.5.1240	RBD	G3DSA:1.20.5.1240	770	821	Merged direct domain	G3DSA:1.20.5.1240	C-terminal	Low	Positional only	1 proteins / 1 hits
G3DSA:3.30.2460.10	Unmapped	-	822	888	Gene3D	None	-	-	-	-
G3DSA:1.20.5.100	RBD	G3DSA:1.20.5.100	889	918	Merged direct domain	G3DSA:1.20.5.100	C-terminal	Low	Positional only	8 proteins / 8 hits
Coil	Unmapped	-	898	918	Coils	Coil	-	-	-	-

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

CBY99572.1

1 918

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	84	84	0,9808
Central domain	85	417	334	0,8892
C-terminal	418	918	500	0,5862

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-84

Central
85-417

C-terminal
418-918

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage phi92 [NCBI]	948870	Uroviricota > Caudoviricetes > Stephanstirmvirinae > Justusliebigvirus phi92 >
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

No CDS data available.

Genome Context

Tertiary structure

1 / 2

PDB ID

Source

Method

Resolution

Oligomeric State

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)