Protein

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Genbank accession
QGZ18091.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIIKPNNNTLSAITALPAAITTGKVLQVVTNTHATRFSTTSTSFVAATGYTVAITPSATSSKIFVTASSMVDTGASGRVGYATLYRDSTNLGDAEGIGAIYSDSGRAYAPITMSVLDSPSTTSAITYQVYWRTNGGAVVFNDTEGEAQLTAFEIAG
Physico‐chemical
properties
protein length:157 AA
molecular weight: 16193,84260 Da
isoelectric point:5,14549
aromaticity:0,08280
hydropathy:0,15350

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC106P
[NCBI] 		2686460 No lineage information
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18091.1 [NCBI]
Genbank nucleotide accession
MN698244.1 [NCBI]
CDS location
range 19939 -> 20412
strand -
CDS
ATGGCAATAATTAAACCAAATAACAATACATTATCAGCGATAACAGCTCTACCAGCAGCTATTACTACTGGTAAGGTTTTGCAAGTTGTAACTAATACCCATGCTACAAGATTTTCTACTACATCAACAAGTTTTGTTGCTGCTACTGGATATACAGTTGCTATTACACCATCAGCGACAAGCAGTAAAATATTTGTCACTGCTAGTTCTATGGTAGATACAGGAGCATCTGGTAGAGTTGGTTATGCAACACTTTATAGAGATAGTACAAATTTAGGAGATGCAGAAGGTATAGGTGCTATATATAGTGATAGTGGCAGAGCTTATGCTCCTATTACAATGAGTGTACTTGATAGTCCAAGCACTACTTCAGCAATAACTTATCAAGTTTATTGGAGAACTAATGGTGGTGCTGTTGTTTTTAATGACACAGAGGGTGAAGCACAATTAACAGCATTTGAAATAGCAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f5589003220fc7904a2240ebe0391ed4665a04ce356cd74b4cc886f4bc5ff057
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank