Protein

View in Explore
Genbank accession
QOI66388.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
METKSFVTLDKDGVVSPSAKAYVYNHGTEDLAQIFSRGGTSLNNPVTSNDNGYFEFSANNGDYDVQFEVSGVKGKKIRIVFSDSKETVKFVSKNTSDIAQAAADIATNKTKIEGLPSAVKTDFAQPEGLSLIGTVSNFDTLRTLIPVYDGARVMVRSYYSGKGKGGGIFVGHTGTQIDDGGFIAAGSGFYWVREDLNLNNLTVLEFGAYADGVNDDQPAVKRMYEFTLSKYARLLSGATQSGNTLSGGRSIQLPVRFATGTYLIKPGVYTTYGNKVPDGASDAGQNPSGYYAAGDFKLEGPFTQSGRQASVRIISDKTDSHVFLINHRRLTVHGIVWDGQQTVAQDETTKMIKGANTITDTVNLVSNKQPFLKNQCPAGQYANITSVQINNTGGVGFDLQDTLDTTIAQIFSSKPALPAIQVTWSDPNNQFYGKWDHSTAIKLMDCNFQNFMTVGVWIPRCAQSLMENAWFEHGYCPFDINNGQWIMNTVCIEDCAKNGIAWNSKFVLTNESVPTGNKVDGDSGPSSADWGSFKTNPDGSDVTAWINGYEVGYAVIQTHGTYLNQPLRYKWLSGIIRGTNNVNSNLWVNIGSLQTPAVGGVWEFEVIASGYLSAGTTPLSVTGDRSTGKTIITVQRGSGSSPKVMYYHQGMSAVKAVKYTPQYNDGIQNLWVQLDTYTGEYSITAKSTGVTRRESGQPSLFTLSGATQTGTPSGTTDAIARFSLHNGRAGVGGQDDMLAINTANINSSDVYVDTFVQYQKLIFNGVIRAMPIFALRPVINTQPTAQSVAAGGTLTLSVVATYTKTSGSWDTYQWYKDGVAISGATSATYTKASVTSDDAGQYKVQVRGDAAVGNARDSNAVAVTIT
Physico‐chemical
properties
protein length:866 AA
molecular weight: 93227,71670 Da
isoelectric point:6,11442
aromaticity:0,10046
hydropathy:-0,27044

Domains

Domains [InterPro]
DC_0471
ATT
5–253
DC_0471 DC_1007
DC_0716
STR
247–775
DC_0716 IPR036179
IPR013783
STR
776–861
IPR013783
IPR007110
STR
777–864
IPR007110
IPR003599
STR
783–864
IPR003599
QOI66388.1
1 866
Architecture
ATT
STR
ATT
ATT 5-253 | STR 254-749 | ATT 750-866
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOI66388.1
1 866
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,9950
Central domain 217 595 380 0,9866
C-terminal 596 866 270 0,7954
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-595
C-terminal
596-866

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage FBB1
[NCBI] 		2776772 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia tracheiphila
[NCBI] 		65700 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOI66388.1 [NCBI]
Genbank nucleotide accession
MT920315 [NCBI]
CDS location
range 6640 -> 9240
strand -
CDS
ATGGAAACCAAAAGTTTTGTAACTTTAGATAAGGATGGAGTAGTTTCTCCATCCGCAAAGGCCTATGTATATAATCATGGGACCGAAGATTTAGCCCAAATATTTTCTAGAGGTGGCACTAGTTTAAACAATCCTGTGACCTCTAATGATAACGGTTATTTTGAATTCTCTGCAAATAATGGAGACTATGACGTTCAATTCGAAGTGTCAGGTGTAAAAGGGAAGAAAATAAGAATTGTATTTTCTGATTCAAAAGAGACGGTAAAATTTGTTTCTAAGAATACCTCCGATATTGCCCAGGCTGCTGCAGATATTGCAACAAACAAAACCAAAATTGAAGGTCTTCCTTCAGCGGTTAAAACAGATTTCGCTCAGCCTGAAGGTCTGTCTTTAATAGGGACAGTGTCAAATTTTGATACTTTAAGAACACTTATACCTGTCTATGACGGCGCCAGAGTAATGGTAAGATCATATTATTCCGGCAAAGGAAAGGGCGGCGGAATATTTGTTGGTCATACTGGAACTCAGATTGATGACGGTGGATTTATAGCAGCGGGTTCAGGATTTTATTGGGTTCGTGAAGACCTAAATCTAAATAACCTGACCGTTTTAGAATTTGGTGCTTATGCGGACGGAGTTAATGATGACCAACCTGCCGTAAAACGCATGTATGAATTCACGTTGTCGAAATATGCAAGACTACTGTCTGGAGCTACCCAAAGCGGAAACACATTAAGTGGCGGCAGATCCATTCAATTGCCTGTAAGATTTGCTACTGGTACATATCTGATTAAGCCTGGGGTTTACACCACTTATGGTAATAAAGTTCCTGACGGCGCATCAGATGCAGGGCAGAACCCTTCAGGATATTATGCTGCAGGTGATTTCAAATTAGAAGGTCCATTCACACAGTCTGGGCGTCAAGCTAGTGTAAGAATCATTTCTGATAAAACAGATTCACACGTATTTCTTATTAACCACAGACGTTTAACAGTGCATGGTATTGTTTGGGATGGTCAACAGACGGTTGCTCAAGATGAAACTACTAAGATGATTAAAGGTGCTAATACTATCACCGATACAGTCAATCTTGTTTCAAATAAACAGCCTTTCTTGAAAAATCAGTGCCCTGCAGGACAATATGCTAATATCACATCTGTGCAGATTAATAACACAGGTGGAGTAGGTTTTGATCTTCAAGATACTCTCGATACAACTATTGCGCAAATCTTTTCAAGTAAACCCGCTTTACCAGCTATTCAAGTTACTTGGTCAGACCCCAATAATCAGTTCTACGGTAAATGGGACCACTCTACTGCTATTAAATTAATGGATTGTAACTTCCAGAACTTTATGACAGTTGGTGTATGGATTCCTCGTTGTGCTCAATCGCTAATGGAAAATGCCTGGTTTGAACATGGTTATTGTCCTTTCGATATCAACAACGGTCAGTGGATTATGAACACCGTGTGTATCGAAGATTGTGCCAAAAATGGTATAGCTTGGAACTCCAAATTTGTATTGACAAATGAATCTGTACCTACTGGTAATAAAGTAGACGGTGATTCAGGTCCTAGCTCTGCGGATTGGGGGTCATTCAAAACTAACCCAGATGGTAGCGATGTTACTGCATGGATTAATGGATATGAAGTAGGATATGCTGTAATCCAGACACATGGTACTTATTTGAATCAACCATTACGTTATAAATGGTTGAGCGGTATTATTCGTGGAACAAACAATGTTAACTCGAACCTATGGGTAAATATCGGTTCTCTTCAGACTCCTGCTGTAGGTGGTGTATGGGAATTTGAAGTTATTGCTTCAGGATACTTATCTGCTGGTACGACTCCTCTTTCTGTAACTGGTGACAGATCTACGGGTAAAACTATTATCACGGTTCAACGTGGTTCTGGTTCTTCTCCTAAAGTTATGTATTACCATCAGGGAATGAGCGCAGTTAAAGCAGTCAAATACACGCCTCAGTATAATGATGGAATCCAGAATTTATGGGTGCAGCTTGATACTTATACGGGTGAATATTCAATCACTGCTAAAAGTACAGGAGTTACTCGCAGGGAATCTGGACAACCTAGCCTGTTTACATTATCCGGTGCTACGCAAACTGGAACCCCATCAGGAACTACCGATGCGATTGCTCGTTTTAGTTTGCATAACGGTAGAGCTGGGGTTGGTGGTCAGGATGATATGCTGGCAATTAATACAGCAAATATTAATAGCTCCGACGTTTATGTTGATACTTTTGTTCAGTATCAGAAACTCATCTTTAACGGTGTTATTCGTGCTATGCCGATATTTGCTCTTCGTCCTGTTATTAACACGCAGCCTACAGCGCAAAGTGTTGCTGCTGGCGGAACTTTAACATTATCTGTTGTTGCTACTTATACTAAAACCAGTGGAAGTTGGGATACATATCAGTGGTATAAAGATGGTGTGGCCATTTCTGGTGCTACAAGTGCTACATACACTAAGGCTTCAGTCACTTCAGATGATGCCGGGCAGTACAAAGTGCAGGTACGTGGTGATGCAGCAGTAGGAAATGCTAGAGATTCAAATGCTGTGGCAGTAACAATAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
98c3cdae95febd18241cd51dd8c2609a06aeece43b0ec8c81b4b15f3aef34fc9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2843
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Erwinia tracheiphila lytic bacteriophage FBB1 isolated from the disease transmitter spotted cucumber beetle Fu,B. and Beattie,G.A. 2021-12 — GenBank