Protein

View in Explore
Genbank accession
QCW23021.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MITPSQFFNDTKEIIEVVEESIEEKQALEEEISHSVSLIDGAFKSIQENILSSNKKELSVYKGQVLEVYNFCNDIKENLLPRYKKEVIQSDLRTDQKIKDLKQEFYETLEERIEETKETIKVYFREEVKDLNKLRASVVLVERYIKENSSAIVSLREEVFAQLRESNSDSEINQIVIQDKLDEISKEYETLSEGLLNEPPSTSNSDPLTPLDQNFVTLDQLQQHYKVFVNRVQQQLATVGGGGEVRLEFLDDIDRSTALIDGRVLAYQASTGKFIGTTTTSGSGLPSGSVGQLLQHDGSSFVGIASTGFSDYVISEGQGYYAYTTDYYTVGVANTTQEIIEGEWTLIQPQVASGGLYNYQPGPMLRCNAGDPWIGMGATIGTGQTEFSLAGTKPGTSCIVRSVFRFEPDTDETDLDMRLHFTTNTATQGTGLTNFNIEKQALVMTVGAAVTYTSETLISFFVGETLYGDTKADAGSFCVEVNGTTDGTLEILGLTVMVDV
Physico‐chemical
properties
protein length:500 AA
molecular weight: 55346,04860 Da
isoelectric point:4,43210
aromaticity:0,08400
hydropathy:-0,29660

Domains

Domains [InterPro]
Coil
Unmapped
11–31
Coil DC_2218
Coil
Unmapped
99–126
Coil
QCW23021.1
1 500
Architecture
STR
STR 92-497 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-B05
[NCBI] 		2484637 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCW23021.1 [NCBI]
Genbank nucleotide accession
MK799832.1 [NCBI]
CDS location
range 162901 -> 164403
strand +
CDS
ATGATAACCCCATCCCAATTCTTTAATGATACCAAGGAGATCATTGAAGTTGTAGAAGAATCTATTGAAGAAAAGCAGGCACTGGAAGAGGAAATTTCTCATTCAGTGTCTTTAATTGATGGTGCGTTCAAAAGTATTCAAGAAAATATTCTCTCTTCTAACAAGAAAGAACTGTCTGTATATAAGGGACAGGTATTAGAAGTTTATAATTTTTGCAACGACATCAAAGAGAATTTACTTCCTAGGTATAAGAAGGAAGTTATTCAATCTGATCTAAGAACAGATCAAAAAATTAAAGATCTCAAACAGGAGTTCTATGAAACTCTTGAAGAAAGAATTGAAGAGACCAAGGAAACCATCAAGGTATACTTCAGAGAGGAAGTAAAGGATCTCAACAAACTCAGGGCAAGTGTTGTTCTGGTTGAAAGATATATTAAGGAAAACTCCTCAGCAATTGTCAGTCTGAGAGAGGAAGTATTTGCTCAACTTAGAGAGTCTAATAGTGATTCTGAAATTAATCAGATTGTCATTCAGGATAAGTTAGATGAGATAAGCAAAGAGTATGAGACGTTAAGTGAGGGACTTCTGAATGAACCACCCTCCACTAGTAATAGTGACCCACTCACACCATTAGATCAGAACTTTGTAACTCTGGATCAGTTACAACAACACTACAAGGTATTTGTAAACAGAGTTCAACAACAACTGGCAACAGTTGGTGGTGGTGGTGAAGTCAGACTTGAGTTTCTGGATGACATTGATAGATCCACTGCTCTGATTGATGGTAGAGTTCTTGCATACCAAGCATCTACTGGCAAGTTTATTGGAACTACCACTACCTCTGGTAGTGGACTTCCTTCTGGATCAGTAGGACAACTTCTACAACATGATGGTTCATCCTTTGTTGGTATTGCATCCACAGGATTTTCAGACTATGTAATTAGTGAAGGTCAAGGTTACTACGCATACACGACTGACTACTACACAGTTGGTGTTGCAAATACCACACAAGAAATTATTGAGGGAGAGTGGACACTTATTCAACCACAAGTAGCATCTGGTGGTTTGTATAATTATCAACCAGGTCCCATGCTTAGATGCAATGCTGGTGATCCTTGGATTGGTATGGGTGCTACAATTGGTACAGGTCAGACAGAGTTCTCATTGGCAGGAACAAAACCTGGCACTTCATGTATTGTAAGATCAGTTTTTAGATTTGAACCTGATACTGATGAAACTGATTTGGATATGAGACTCCACTTCACTACTAATACAGCAACTCAAGGAACAGGACTCACTAACTTCAACATTGAGAAACAGGCACTGGTTATGACTGTTGGTGCTGCTGTCACATACACCAGTGAAACATTAATCTCTTTCTTTGTTGGTGAGACATTGTATGGTGATACAAAGGCAGATGCAGGTTCATTCTGTGTTGAGGTAAATGGAACAACTGATGGAACCCTAGAGATTCTGGGTTTAACTGTTATGGTAGACGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d3c4f122e6370cd0fe959ed7acf0e310e256aa354836b233b246aa79b2b63a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4891
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-B05 from the Bohai Sea, China Jiang,T. 2020-10 — GenBank