Protein

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Genbank accession
XYH49118.1 [GenBank]
Protein name
terminase large subunit
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MKKASKLLLALIPALSLSVFSAGVYAADASGINGTSYYGVTVDQLKGHEYKNLIDFWKDLGFSGKAYLDGKVVNAGTKQPDSVNIQNTAGKYLKYSLFDYGESGLTNTELRAPRSNEIVSYYDYANETAYFVNTKTNQILFSADGEGVVTTVGADGKTYSRHVPEISEYIYEIKMKSVNPLDSTIDTGLSAADVTDIHARLSSLGTGKTQVGGGATAGGENATAVGYNAIANHTNSVAVGANSQTTRPDEVNVGNRVIGGLRDGVQAADAATYGQLERYRIAEENARIQGDAQTLKSANTYTDNRVSTLERSTNQQFRQLRDEVEKNRKRADAGIAGAMAMTAIPVVEGKTYSFGMAASNYRDEQAIAAGMHFRTTENSAVRLNASWDTQNGSGVAAGMSVGW
Physico‐chemical
properties
protein length:403 AA
molecular weight: 43072,14620 Da
isoelectric point:5,83767
aromaticity:0,08189
hydropathy:-0,38164

Domains

Domains [InterPro]
IPR011049
STR
182–287
IPR011049 G3DSA:3.30.1300.30
IPR011049
STR
203–277
IPR011049 IPR005594
IPR008640
Unmapped
217–243
IPR008640 IPR045584
XYH49118.1
1 403
Architecture
STR
RBD
ATT
STR 182-287 | RBD 288-347 | ATT 348-403
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiSTEC1589-Stx1c
[NCBI] 		3385105 Viruses >
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH49118.1 [NCBI]
Genbank nucleotide accession
PQ600364 [NCBI]
CDS location
range 45015 -> 46226
strand +
CDS
ATGAAAAAGGCAAGCAAGCTATTGTTGGCTTTAATACCAGCATTAAGCCTGTCGGTATTTTCTGCTGGCGTATATGCAGCAGACGCCTCTGGAATTAATGGCACTTCATATTATGGAGTGACTGTTGATCAGTTGAAAGGACATGAATATAAAAATTTAATTGATTTTTGGAAAGACCTCGGCTTCTCAGGAAAAGCATATCTGGATGGAAAAGTGGTAAATGCAGGCACAAAACAACCAGATAGTGTAAATATACAAAATACGGCAGGGAAATATTTAAAATATTCTCTGTTTGATTACGGCGAGTCCGGGTTAACAAATACAGAATTACGGGCACCGAGAAGTAATGAAATTGTCTCATATTATGACTATGCGAATGAGACAGCTTATTTTGTAAACACAAAAACCAATCAAATTCTCTTTAGTGCAGATGGCGAAGGCGTGGTCACGACAGTGGGCGCTGATGGAAAAACGTATTCAAGACATGTTCCTGAAATCAGTGAATATATTTATGAAATTAAAATGAAGTCTGTAAACCCGCTAGACTCCACTATTGACACTGGTCTTTCTGCTGCAGATGTAACAGATATTCACGCCCGTCTGTCTTCTCTGGGCACAGGTAAAACTCAGGTTGGTGGCGGGGCAACAGCAGGCGGAGAAAACGCCACTGCTGTCGGTTACAACGCCATTGCAAACCATACGAACAGTGTTGCTGTAGGGGCTAACTCTCAGACCACTCGCCCCGATGAAGTAAATGTGGGGAATCGTGTAATTGGTGGGCTTCGTGATGGTGTTCAGGCTGCGGATGCCGCAACCTATGGTCAGTTAGAGCGCTATCGTATTGCAGAAGAGAATGCCCGTATTCAGGGTGATGCACAGACACTGAAGTCTGCTAATACCTACACAGATAACCGGGTCAGTACCCTGGAGCGTAGTACTAATCAGCAATTCCGTCAGTTACGTGATGAGGTGGAGAAAAACCGTAAACGTGCAGATGCAGGTATTGCAGGAGCAATGGCGATGACTGCCATTCCTGTTGTTGAGGGTAAAACGTACTCCTTTGGTATGGCTGCAAGTAACTACCGTGATGAGCAGGCTATCGCAGCAGGTATGCACTTCCGCACCACTGAAAATTCTGCTGTACGTTTGAATGCTTCATGGGATACCCAGAACGGTTCAGGTGTTGCTGCGGGTATGTCTGTCGGCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d353f6ea17876b32fdd5e38e1242eb5ad549e5ee7f4374a85613dadf96dc614
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50