Protein

View in Explore
Genbank accession
BAS32846.1 [GenBank]
Protein name
Tai fiber
RBP type
TF
Evidence RBPdetect
Probability 0,54
Protein sequence
MIAEGDIKLMKSEVLLDTDDGGGRMTSNAVVDGLSNNVFPDISELDRTYGRVALRKAYAAIDTSNTDSYFGVQAIVAEAPADPRVTMALFSTKSWTDRRTAARDRVEQYLARGPKWPGQLLEKQLAGQRAITLLLKAGDAQPATGQSLVLVQDEGKATEYEQFIRVTRVTATARDFVTVGTGNTTLRFTGVVCTVELSDPLRYDFNGAAPSLYDDITPQAVCRDTRVADAAKYYGIQPTTAEAKPGDLTVKVTDIFTQLVPSAQSESPLVDVLASSKTTPVVSSAVQGFNMQMNLSGALPWVRFLYLGVTPGTLSIAAPSGTVTDSAGNLLQNGSQVGTIDYATGKLQFTSNVGAGQVGLSYLPAVAPARSAESASIEIGAENRGNVYTITLNPPPAPRSLSIAYMAQGRWYELTDQGGTGNTGEVRGADSAIGSGSVNYATGSVVLTTGALPDAGTDVLFFWSGRPNYMVRQQSTTQKPGIVFRIEQPGNTRYLDGSATITWPRASSGNYIASINADGTVSGDATGSMRWDGVGFEVKLYPSVLPAKGAVFTVNYQLGEKRTKTFPSVVRDPQGNVSVAVDDRNILRNSVRLQWSIGIADFAAISRVPATMQTVSQVDTNVLARDTGGGALARQVGTGFTVQAGTVDYAAGSITFAPDITVSVPQPEYNVGVIGYAGGPFGAGASLLYRNTFVGIAYHNAAGTYDGGIITVEYMAQATTQEENQQQLTVDSWSIDLTDHYGEKVVPGSVLFTWAGRTYYDLAGYLYTDFDPATGSGVQAGTVNYSSGIAEVTLWTSGGANDTAIKSLLTEVSGQPVDYVVFRVPAAPVRPGSLQVRAVPVSGQPISITADSTGLITSPVCVGVIDYQTGIVRIRFGRLVDAAGNENKIWYDPAAVVSGKVFEPLPVYADTVKYNAVAYTYLPLSADVLGLDPVRLPGDGRVPIYRKGDVVVIHHTAQKPFPASPGAGTVVDVGRVRLASLHVVDNAGTALDSSVYTADLDAGTVTLKSGFNSAGLQLPLLAIHRIEDMALVSDVQINGTLQLTSSLTHDFPAGDTRVSSALVIGDLQSRAYNLFPQQSWTNAWSDTLIGNPTTSQFNATQYPVVVTNRGALQERWSLIFTSTTDFRIVGESVGQVGVGTINADAAPPNPATGAPYFTIKAAGWGGGWSQGNVLRFNTAAANYPIWIARTVLQGPAQQINDTFRVQIRGDIDR
Physico‐chemical
properties
protein length:1213 AA
molecular weight: 128565,55650 Da
isoelectric point:5,07245
aromaticity:0,08409
hydropathy:-0,05293

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RS138
[NCBI] 		1483485 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAS32846.1 [NCBI]
Genbank nucleotide accession
AB916497 [NCBI]
CDS location
range 31032 -> 34673
strand +
CDS
ATGATCGCGGAAGGCGATATCAAGCTGATGAAGTCCGAGGTACTGCTGGACACCGACGACGGCGGTGGCCGCATGACCAGTAACGCCGTGGTCGACGGGCTGTCCAACAACGTGTTCCCGGACATATCGGAGCTGGACCGCACGTACGGCCGCGTGGCGCTGCGCAAAGCGTATGCGGCCATCGACACCAGCAACACCGACAGCTATTTCGGGGTGCAGGCCATCGTGGCCGAGGCGCCGGCCGATCCGCGCGTCACCATGGCGCTGTTCAGCACGAAGAGCTGGACCGACCGCCGCACCGCCGCGCGGGACCGCGTGGAGCAGTACCTGGCGCGCGGCCCGAAGTGGCCGGGGCAACTGCTGGAGAAGCAACTGGCCGGCCAGCGGGCCATCACCCTGCTGCTGAAGGCCGGCGACGCGCAACCGGCCACGGGCCAGTCCCTGGTGCTGGTCCAGGACGAAGGCAAGGCGACCGAGTATGAGCAATTCATCCGCGTCACGCGCGTGACCGCGACCGCGCGCGATTTCGTCACGGTCGGCACCGGAAACACCACCCTGCGCTTTACCGGTGTCGTCTGCACGGTCGAGCTGAGCGACCCGCTGCGCTATGACTTCAATGGCGCGGCTCCGTCGCTCTACGACGACATCACGCCGCAGGCGGTATGCCGTGACACGCGCGTGGCTGATGCCGCCAAGTACTACGGCATCCAGCCGACCACGGCGGAAGCCAAGCCCGGCGACCTGACCGTCAAGGTGACGGACATCTTTACGCAACTGGTGCCGTCTGCACAAAGCGAGTCGCCGCTGGTCGACGTGCTGGCATCATCCAAGACCACACCCGTGGTCAGCAGCGCGGTTCAGGGCTTTAACATGCAAATGAACCTGTCGGGCGCGCTGCCCTGGGTTCGCTTCCTGTACCTGGGTGTCACGCCCGGAACCCTGTCGATCGCCGCGCCCAGCGGCACAGTGACGGACTCGGCCGGCAATCTGCTGCAGAACGGCAGCCAGGTCGGCACCATCGACTACGCGACCGGCAAGCTGCAATTCACGTCCAACGTGGGCGCGGGCCAGGTCGGCCTGAGCTATCTGCCTGCGGTGGCGCCGGCACGCTCGGCGGAAAGCGCGTCCATCGAGATCGGCGCGGAAAACCGGGGTAACGTCTATACGATCACCCTCAACCCGCCACCCGCACCCAGAAGCCTGTCCATTGCCTACATGGCCCAGGGCCGTTGGTACGAGCTGACCGACCAGGGTGGCACCGGCAACACAGGCGAGGTGCGCGGCGCGGACAGCGCCATCGGCAGCGGCTCGGTCAACTACGCGACCGGCTCGGTCGTGCTGACGACGGGCGCATTGCCCGACGCCGGCACCGATGTCCTGTTTTTCTGGAGCGGCCGGCCGAACTACATGGTTCGCCAGCAGAGCACCACGCAGAAACCGGGCATCGTGTTCCGCATCGAGCAGCCGGGCAATACGCGCTATCTCGACGGGTCGGCCACGATCACCTGGCCACGGGCCAGCAGCGGCAACTACATCGCGTCGATCAATGCCGACGGCACCGTTTCCGGCGATGCCACCGGCAGCATGCGCTGGGATGGCGTGGGCTTCGAGGTCAAGCTCTACCCCAGCGTGTTGCCCGCCAAAGGCGCGGTGTTCACGGTCAATTACCAACTGGGCGAGAAGCGCACCAAGACGTTTCCCAGCGTGGTGCGCGACCCGCAGGGAAATGTGAGCGTGGCCGTGGATGACCGCAACATCCTGCGCAACAGCGTCCGCCTGCAGTGGAGCATTGGCATTGCGGACTTCGCGGCGATTTCGCGCGTACCGGCGACCATGCAGACGGTCAGCCAGGTGGATACCAACGTACTGGCCCGCGACACAGGTGGCGGCGCACTGGCGCGTCAGGTTGGCACGGGCTTTACCGTGCAGGCCGGCACGGTCGACTATGCAGCTGGCTCGATCACATTCGCCCCCGATATCACCGTGTCGGTCCCGCAGCCGGAATACAACGTTGGCGTCATCGGCTACGCGGGCGGCCCGTTCGGCGCAGGCGCGAGCCTGCTGTACCGAAACACGTTTGTCGGCATCGCCTACCACAACGCGGCGGGCACGTACGACGGCGGAATCATCACCGTGGAATACATGGCCCAGGCCACCACGCAGGAGGAAAACCAGCAGCAGCTCACGGTGGACAGCTGGTCCATCGACCTGACGGACCACTACGGCGAAAAGGTCGTGCCCGGCTCCGTGCTGTTCACCTGGGCCGGCCGGACCTACTACGACCTGGCGGGCTACCTGTACACGGATTTCGATCCGGCAACCGGCTCCGGTGTCCAGGCCGGCACGGTCAACTACAGTTCGGGCATTGCGGAGGTGACCCTGTGGACCAGCGGCGGCGCCAACGACACCGCCATCAAAAGCCTGCTGACCGAGGTCAGCGGCCAGCCGGTGGACTACGTGGTGTTCCGCGTGCCGGCTGCCCCGGTGCGCCCCGGCAGCCTGCAGGTACGTGCCGTACCGGTATCCGGCCAGCCGATCAGCATCACCGCCGACAGCACGGGGCTTATCACGTCGCCGGTTTGTGTCGGCGTCATCGACTACCAGACCGGCATCGTGCGTATCCGGTTCGGCCGCCTGGTCGACGCGGCCGGCAACGAAAACAAAATCTGGTATGACCCGGCTGCCGTGGTGTCGGGCAAGGTTTTCGAGCCGCTGCCGGTCTATGCGGACACGGTCAAGTACAACGCCGTCGCCTACACGTACCTGCCGCTGTCGGCCGATGTGCTGGGCCTGGACCCTGTCCGCCTGCCTGGCGATGGTCGCGTGCCGATCTACCGCAAGGGCGATGTGGTCGTCATCCACCACACCGCGCAGAAGCCGTTTCCCGCATCGCCTGGCGCCGGCACTGTGGTCGACGTCGGCCGCGTCCGCCTGGCCAGCCTGCACGTGGTCGACAACGCTGGCACTGCGCTAGATTCGTCCGTCTACACCGCCGATCTGGACGCCGGCACCGTGACCCTGAAAAGCGGGTTCAACTCGGCCGGCCTGCAACTGCCGCTGCTTGCCATCCACCGCATCGAGGACATGGCGCTGGTGTCCGATGTGCAGATCAATGGCACGCTGCAGCTCACGAGTTCCCTCACGCATGACTTCCCGGCCGGCGATACGCGGGTGTCCAGTGCGCTGGTGATTGGCGACCTGCAGTCCCGGGCCTACAACCTGTTTCCGCAACAGAGCTGGACAAACGCCTGGTCGGACACGCTCATCGGCAACCCGACCACGTCGCAATTCAACGCGACACAGTACCCGGTCGTGGTGACCAATCGCGGCGCGCTGCAAGAGCGTTGGTCGCTCATCTTCACGTCCACAACGGATTTCCGAATCGTCGGGGAGTCGGTCGGCCAGGTGGGAGTCGGCACGATCAACGCGGACGCCGCGCCGCCGAACCCGGCCACGGGCGCACCGTATTTCACGATCAAGGCCGCTGGGTGGGGCGGCGGCTGGTCGCAAGGCAACGTGCTGCGATTCAACACAGCGGCCGCCAACTATCCCATCTGGATCGCCCGCACGGTCCTGCAGGGGCCGGCCCAACAGATCAACGACACCTTCCGCGTCCAGATTCGCGGCGACATCGACCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb1bfac8a00c2846a17eed7dc0089ee93fa80af8d5b324b83583c401631e37c5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Characterization of Ralstonia solanacearum Phage RS138 Kamei,K. and Van,T.T.B. 2015-11-03 — GenBank