Protein

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Genbank accession
AKY02258.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSNILDSAKTFVENNTDIKLAHLISLELPGEQGVHVYFTDYFRDITYKGQKYVSGVVKRVGDVKQTKELSIYRVPVQVSGAIGQEVDRVLNSKSFLNRKIKIHSAFIDENGEVVPMYSDGSTMEYFTGIIVKSSISESNAVKGKGRSTITWSCASDMYSLDAINGRLTDDTSHRGLVNVNGVMQPSGAAKKPEYQLDKGFFHANKSVKLLAEYQTKEKRFRLKKRRAGGFRGLMGQKHIDMEEYWADVVKEVDMDINLTAKYIPVVYGVQKVAGIPIFFDTDISNPEEIWAVYAFCEGEIDGFLDIFFGDNPMICISENDQSKRACIGMKRNNGDTIGALAPAGGRTVPSKHGQHYVYNDGNGPIEFWTFHGSTNQDAAQVLVDKASAGEFKLQNDGNYGAEYWDESFKLTDTAYLVVKFELNENRTSIPEVSAEVQGKKVPIYHEDGTVTSDKTSLNLAWQTLDYMRSSTYGAGLTLDEIDLSSVRECATLMDTLDTSYQPDWVPYWRYLGWEDYSAENRQILQGSAILSTSDTVFKNIQALIAQFDASLNIVSGKYTLTMEADRPVAYDIDEGDIIDGSVKVDDNSMENKYNSVQASIVDPASAWGSNTITFFNKKYKEEDNGKDRKANITFPFITNYYTARTRAEYYLNKSRYNRVVSFELPFSFLWLYPNASITLTKKRYNWDKKHFLIQDMTWKANGHISVTAREYAPDVFINSPQADNSNDQIPDVIVNVLPPRDLQYDPNIGESKVGLNGTLSWAPSLTKRVAYYTVKYTGLTDLLTIPVSGTGSLNERIELPLYDLAEGEYTFEVRAVSPEGETSLPAKLVVHVNPSAXLPKISGFRLINRSSTSDKIFIGKDADIAWNELLEGATLSGFRYRLRFEDGTTGELLRDVTTTNLSYQYTLEMNKQDCTRVKGTLSVCRNLSIYIRGEADNNITSIDWTTL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 106233,05200 Da
isoelectric point:5,27099
aromaticity:0,10677
hydropathy:-0,39715

Domains

Domains [InterPro]
DC_0187
STR
241–941
DC_0187
IPR032876
ATT
538–686
IPR032876
AKY02258.1
1 947
Architecture
STR
ATT
STR
STR 241-537 | ATT 538-686 | STR 687-941 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKY02258.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,8798
Central domain 307 521 216 0,4244
C-terminal 522 947 425 0,0637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-521
C-terminal
522-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VorS-PVo5
[NCBI] 		1689660 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio ordalii
[NCBI] 		28174 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKY02258.1 [NCBI]
Genbank nucleotide accession
KT345706.1 [NCBI]
CDS location
range 50696 -> 53539
strand -
CDS
ATGAGCAATATACTAGATTCTGCAAAGACCTTTGTAGAGAATAATACAGATATTAAGCTTGCTCACCTTATTTCTTTGGAGCTCCCAGGTGAGCAAGGAGTACACGTTTACTTTACGGACTACTTTAGAGATATTACTTATAAAGGGCAGAAGTATGTTTCGGGTGTTGTCAAAAGAGTAGGCGATGTAAAACAAACCAAAGAGTTATCCATATACCGYGTACCTGTACAAGTTAGTGGGGCAATAGGGCAAGAAGTAGATAGGGTTTTGAATTCTAAAAGCTTCTTAAATAGAAAAATAAAAATACATAGCGCGTTCATAGACGAGAACGGCGAAGTCGTCCCTATGTACTCCGATGGTAGTACTATGGAGTATTTTACTGGTATTATTGTAAAGAGCTCTATTAGTGAGTCCAACGCAGTAAAAGGTAAGGGTAGGTCTACCATTACGTGGAGCTGTGCTAGCGATATGTATTCCTTGGACGCTATTAACGGTAGGCTTACTGATGATACCTCACACAGAGGGTTGGTTAATGTGAACGGAGTTATGCAACCTTCAGGGGCAGCAAAAAAGCCAGAGTATCAGTTAGATAAAGGTTTCTTCCACGCCAATAAGTCAGTGAAACTCCTAGCGGAATACCAAACAAAAGAGAAACGCTTTCGTCTTAAAAAGAGACGTGCAGGCGGGTTCCGAGGATTGATGGGACAAAAACATATTGACATGGAAGAGTACTGGGCAGATGTTGTAAAAGAAGTTGATATGGATATCAACCTTACAGCTAAGTATATTCCAGTAGTCTATGGTGTACAAAAAGTAGCTGGTATACCTATCTTTTTCGACACAGATATATCCAACCCTGAAGAGATATGGGCTGTATACGCATTTTGTGAGGGAGAGATAGATGGCTTCTTAGATATATTCTTCGGAGACAACCCTATGATTTGTATCTCTGAGAATGACCAGTCTAAGCGTGCTTGTATTGGTATGAAGCGTAACAACGGAGACACTATAGGAGCTTTAGCGCCTGCTGGAGGTAGGACAGTACCTAGTAAACATGGTCAGCATTACGTGTATAATGATGGTAACGGTCCGATTGAGTTCTGGACATTCCACGGCTCTACAAACCAAGACGCAGCACAGGTACTTGTTGACAAAGCTAGTGCAGGAGAATTCAAACTACAGAATGATGGCAATTATGGGGCTGAGTAYTGGGACGARTCYTTCAAGCTTACTGATACCGCTTATCTAGTAGTCAAATTCGAACTAAACGAAAACAGAACCTCTATCCCTGAAGTATCCGCAGAGGTACAAGGCAAAAAAGTACCGATATATCATGAAGATGGTACTGTGACCAGTGATAAAACCTCCTTAAACCTAGCATGGCAAACATTAGATTACATGAGAAGTAGTACTTATGGAGCAGGGCTTACTTTAGATGAGATAGACCTATCCTCTGTTCGAGAGTGTGCTACCTTGATGGACACCTTAGATACGTCATACCAGCCGGATTGGGTACCTTATTGGAGGTATTTGGGTTGGGAAGATTACTCTGCAGAAAATAGACAGATACTACAAGGCTCCGCGATACTATCTACTAGTGATACTGTATTTAAAAACATACAGGCCCTTATAGCACAGTTTGATGCGTCACTTAATATAGTTAGTGGTAAGTATACTCTAACAATGGAAGCAGATAGACCTGTAGCTTATGATATAGATGAGGGGGATATTATTGACGGTAGTGTAAAAGTCGATGATAACTCTATGGAGAATAAATACAACTCTGTACAGGCAAGTATAGTAGACCCAGCTAGTGCTTGGGGTAGTAACACGATTACTTTCTTCAATAAGAAGTACAAAGAAGAGGATAACGGTAAAGATAGAAAAGCTAATATTACTTTTCCTTTCATTACTAATTATTACACTGCAAGAACTAGAGCTGAGTACTATTTAAATAAATCTAGATATAATAGAGTGGTCTCTTTTGAGCTACCATTTTCCTTCTTATGGTTGTACCCAAATGCTAGTATAACCTTAACTAAGAAAAGATATAATTGGGATAAGAAACACTTCCTTATTCAAGATATGACCTGGAAAGCTAACGGGCACATCTCAGTAACTGCTAGGGAGTACGCACCTGATGTATTCATAAACTCACCTCAAGCAGACAATAGTAACGATCAAATACCTGATGTAATAGTTAATGTATTACCTCCTAGAGATCTACAATACGACCCTAATATTGGAGAGTCTAAAGTAGGTCTGAATGGTACTCTCTCGTGGGCACCAAGTCTCACAAAGAGGGTCGCTTATTACACGGTTAAGTATACGGGCCTTACTGACCTACTTACTATTCCGGTTTCTGGTACAGGATCTTTGAATGAACGAATAGAGCTGCCCCTATACGATTTAGCGGAAGGGGAGTACACATTCGAAGTCAGGGCAGTCTCCCCTGAAGGAGAGACCAGTTTACCCGCCAAACTAGTAGTACACGTGAATCCTAGCGCARTACTACCAAAAATATCTGGATTTAGATTAATAAACCGGTCTTCTACTTCTGATAAAATATTTATAGGTAAAGATGCTGATATAGCATGGAACGAATTATTAGAAGGGGCAACTTTATCTGGTTTTAGGTATAGATTGCGTTTCGAGGACGGAACTACAGGGGAGTTATTAAGAGATGTGACTACGACTAATTTATCATATCAATACACCCTAGAGATGAACAAACAAGACTGTACTCGTGTTAAAGGTACTTTAAGTGTCTGTAGAAACTTAAGTATCTACATCAGAGGCGAGGCAGATAATAACATAACTTCAATTGACTGGACAACCTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8548ffa0a4b03094a5d7f52d956c9149fd9f3c512963c85915695b99a80ef32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8576
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio ordalii Bacteriophage pVo5 Echeverria-Vega,A.B., Morales-Vicencio,P.A., Saez-Saavedra,C.F. and Araya,R. 2016-07-04 — GenBank