Protein

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UniProt accession
A0A8S5TLP8 [UniProt]
Protein name
Collagen I alpha 1
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MKTLKFTIRDKHITRQDGNAVVAGAVNHYELELAFDEDWYGLTKTVVLENGDVKVELLYTGGLTLPWEVCREGGLLLSVRGTKTLGDGRTQVVRTARMAKPIPVEPGGSEEGQTPSGFTPELAEQVLAVLGDLAALLTKNKNTMVAAINEIYQEAGIESIRFKETDAEGNNVYTVNLSRGENYEIKAPIGKTGPQGAQGIKGDTGRKGDKGDKGEKGDTGEKGDTGATGAKGETGATGATGPQGITPTIGENENWYLGNVDTGKPSRGRQGEKGEKGETGAKGETGATGATGPQGETGPRGPQGLQGVQGEPGKGLTISGYYATAQALAAAVTNPEAGDAYGVGTAEPYDIYIYDGVTHAWVNNGPLQGAKGEKGEKGDTGEKGEPGKDGSPGAAGAPGATGTTGTTFTPSVSADGTLSWTNDGGKENPASVNIKGPQGEPGAKGETGAAGATGETGPEGPQGPKGAQGPQGDPGPTGPQGPAGHTPVKGTDYFTAADKSEIAQAAAALVSVPSASSTTPKAPGTASAGTSAAYARGDHVHP
Physico‐chemical
properties
protein length:542 AA
molecular weight: 54648,17170 Da
isoelectric point:5,00924
aromaticity:0,04797
hydropathy:-0,63506

Domains

Domains [InterPro]
DC_1279
STR
77–264
DC_1279 IPR008160 IPR008160 DC_2298
IPR050149
Unmapped
178–492
IPR050149
IPR008160
STR
190–244
IPR008160 DC_1340 IPR008160
G3DSA:2.60.120.220
ATT
219–287
G3DSA:2.60.120.220 G3DSA:1.20.5.320 G3DSA:1.20.5.320
A0A8S5TLP8
1 542
Architecture
STR
ATT
STR
STR 77-218 | ATT 219-287 | STR 288-527 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctO1718
[NCBI] 		2827733 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF64097.1 [NCBI]
Genbank nucleotide accession
BK032850 [NCBI]
CDS location
range 14034 -> 15661
strand +
CDS
ATGAAAACGCTGAAATTTACGATCCGGGACAAGCACATCACGCGGCAGGACGGGAACGCGGTGGTGGCCGGGGCAGTGAACCACTACGAGCTGGAGCTGGCGTTTGATGAGGACTGGTACGGGCTGACGAAAACCGTCGTGCTGGAAAATGGGGACGTGAAGGTCGAGCTGCTGTACACGGGCGGACTGACGCTGCCGTGGGAGGTGTGCCGCGAGGGCGGCTTGCTGCTGTCGGTACGCGGGACAAAGACGCTCGGCGACGGGCGGACGCAGGTGGTACGGACGGCGCGGATGGCGAAGCCGATCCCGGTCGAGCCGGGCGGAAGCGAGGAAGGGCAGACCCCATCCGGCTTTACGCCTGAGCTGGCGGAACAGGTGCTGGCTGTCTTGGGTGATCTTGCGGCGCTTCTGACAAAGAACAAGAACACGATGGTCGCGGCCATCAACGAGATCTATCAGGAGGCCGGGATCGAGAGCATCCGCTTCAAGGAGACTGACGCCGAGGGAAACAACGTCTACACCGTGAACCTATCCCGCGGGGAAAACTATGAGATCAAGGCTCCCATCGGCAAGACTGGGCCGCAGGGCGCACAGGGCATCAAGGGCGATACCGGCCGGAAGGGCGACAAGGGAGACAAAGGCGAGAAGGGCGACACTGGGGAGAAAGGTGACACTGGCGCAACGGGCGCAAAGGGCGAAACGGGTGCGACCGGAGCTACCGGCCCGCAGGGCATTACGCCCACCATCGGGGAGAATGAGAACTGGTATCTTGGAAATGTCGACACCGGGAAGCCATCCCGAGGCCGTCAAGGAGAGAAAGGCGAGAAAGGCGAGACCGGGGCCAAGGGCGAAACTGGCGCGACGGGCGCGACAGGCCCACAGGGCGAGACGGGGCCGAGAGGGCCGCAGGGCTTACAGGGCGTTCAGGGTGAACCCGGAAAGGGATTGACCATCTCGGGCTACTACGCAACGGCGCAGGCTCTGGCCGCTGCGGTGACGAACCCGGAGGCGGGCGACGCCTACGGCGTGGGCACGGCGGAGCCGTATGACATTTACATCTACGACGGCGTGACCCATGCGTGGGTGAACAACGGCCCCTTGCAGGGCGCGAAGGGTGAGAAGGGAGAAAAGGGCGACACCGGAGAAAAGGGCGAGCCGGGAAAAGACGGCAGCCCCGGCGCAGCCGGTGCACCCGGCGCGACGGGCACGACGGGCACGACGTTCACGCCGTCCGTATCAGCGGACGGGACGCTCAGCTGGACGAACGACGGCGGAAAGGAGAATCCTGCCTCGGTGAACATCAAAGGCCCACAGGGCGAACCCGGCGCAAAAGGTGAAACAGGCGCGGCAGGCGCGACCGGCGAGACCGGTCCGGAGGGGCCGCAGGGGCCAAAGGGCGCACAGGGGCCACAGGGCGACCCCGGCCCGACCGGCCCGCAAGGCCCCGCCGGTCACACGCCGGTGAAGGGGACGGATTATTTCACCGCTGCCGACAAGAGCGAGATCGCGCAGGCTGCGGCGGCGCTGGTCAGTGTGCCGAGTGCTTCTTCCACCACACCGAAAGCGCCGGGGACGGCGTCGGCTGGTACCTCTGCGGCGTATGCCAGAGGGGATCATGTACACCCAAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
e12e93b891ed5d65ec5886aff8a8db3822dc8a2b3703a1d03b5962a9fea4e5ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5936
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50