Protein

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Genbank accession
URG13113.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTSKIKVDNINKVSDDSNIIKKCGTTTTIGSGASNPIVVDGSAVTLGRCGGTVALASGATQTGFGRTGTVDWQTTPKTATFTAANGEGYFANTSGGAFTMNLPAGSAGAIVSVADYTNTFQTNALTVSPNGSEKIGGVAATQTLTTEGQSVTFVYVDGTEGWKNVHDSTSNVTGNPFIQATGGTITTSGNCKIHTFTGPGTFCVSSISQTAPQNVVSYMVVAGGGGQTNIGHYNGGGGAGGFREVKAPDTPYTASPLDGYPSAPNRITVTATSFPITVGGGGTGGPGPSGCGSNSVFSTITSTGGGGGGSPALGGGQTGGSGGGGSTFTPASNRPGSAGNTPPVSPPQGNSGGIGKLSSPPGTAGSGGGGGATAAGGNSNTSTPITAGNGGAGATTSISGSPTAYAGGGGGSAYLSGAGGSGGSGGGGNGGQYPNNPAATNGTANTGGGAGGDAGFTNPTGGSGIVIIRYKFQ
Physico‐chemical
properties
protein length:473 AA
molecular weight: 44616,69420 Da
isoelectric point:8,21484
aromaticity:0,05920
hydropathy:-0,20909

Domains

Domains [InterPro]
DC_1064
ATT
1–184
DC_1064 IPR049304
IPR036240
STR
72–190
IPR036240
URG13113.1
1 473
Architecture
ATT
STR
ATT 1-190 | STR 208-471 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage phage 023Pt_psg01
[NCBI] 		2945965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13113.1 [NCBI]
Genbank nucleotide accession
MW574966 [NCBI]
CDS location
range 38865 -> 40286
strand +
CDS
ATGACAAGTAAAATAAAAGTAGATAATATAAATAAAGTTTCAGATGATTCAAACATCATCAAAAAATGTGGAACAACTACTACAATCGGATCAGGAGCAAGTAATCCCATTGTTGTAGATGGATCTGCAGTTACACTAGGTCGTTGTGGTGGTACCGTTGCTTTAGCAAGTGGTGCAACACAGACAGGTTTCGGTAGAACAGGGACTGTTGATTGGCAGACAACTCCAAAAACGGCAACTTTTACAGCAGCTAATGGAGAGGGTTATTTTGCAAACACTTCAGGTGGTGCATTTACAATGAACTTACCAGCAGGTTCTGCTGGAGCTATAGTCTCGGTTGCAGATTATACAAACACATTTCAAACAAACGCTTTAACAGTTTCACCAAATGGATCAGAAAAAATTGGTGGAGTTGCAGCTACACAAACTTTAACTACAGAAGGTCAATCAGTAACTTTTGTATATGTAGATGGAACTGAAGGCTGGAAAAACGTTCACGATTCCACATCTAATGTAACAGGTAATCCTTTTATACAAGCAACAGGTGGAACTATTACTACATCAGGTAATTGCAAAATTCACACATTTACAGGCCCAGGAACTTTCTGTGTATCTTCTATTTCACAAACAGCTCCACAGAACGTAGTTTCTTATATGGTAGTAGCAGGTGGTGGTGGCCAAACAAATATCGGACACTATAATGGTGGAGGAGGAGCAGGTGGTTTTAGAGAAGTAAAAGCTCCTGACACTCCTTATACAGCAAGTCCACTAGATGGATATCCATCCGCACCAAATAGAATAACAGTTACAGCAACATCTTTTCCAATTACAGTTGGAGGAGGTGGAACAGGTGGTCCAGGTCCATCAGGTTGTGGATCTAATTCAGTTTTTTCAACAATAACATCAACAGGTGGTGGAGGTGGAGGTTCCCCTGCATTAGGTGGAGGCCAAACTGGAGGATCAGGTGGTGGTGGATCAACATTTACTCCTGCTAGTAACAGACCAGGTTCAGCAGGTAATACACCTCCTGTTAGTCCACCTCAAGGAAATTCAGGTGGTATTGGAAAATTATCGTCACCTCCTGGTACAGCAGGAAGTGGTGGTGGCGGTGGTGCAACAGCAGCTGGTGGTAATTCAAACACTAGCACTCCTATAACTGCGGGAAATGGTGGAGCAGGTGCTACAACATCAATTTCAGGAAGTCCAACTGCATACGCAGGTGGTGGAGGCGGATCAGCATATTTATCAGGTGCTGGAGGTTCTGGAGGATCAGGTGGTGGTGGAAATGGTGGTCAATATCCCAATAACCCAGCAGCAACAAATGGAACAGCTAACACAGGAGGTGGTGCAGGTGGTGACGCAGGATTTACAAATCCTACAGGTGGTTCAGGCATAGTAATAATAAGGTATAAATTTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
14fda8c7630ac0924a5aa6d04ac320d9261409b0876a8c788ffadd61ff65d21a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8038
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Global distribution of Type-VIII Secretion System operons transferred between Myo and Podoviruses of the dominant marine bacterium SAR11 Wittmers,F., Needham,D.M., Hehenberger,E., Giovannoni,S.J. and Worden,A.Z. 2011-12 — GenBank