Protein

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Genbank accession
ACB97591.1 [GenBank]
Protein name
tail protein Pb4
RBP type
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MDVGVGAPIVVVETTGEASYCTIELKSTATEDSPWTKYYIGALGSTIKFGGVPIGDYKIRISGQVTMPDGVTVDSSGYYEFPNILTVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWEWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSMGIPGLGGWDDGQANAFFQNNFGKPPVKYDVLTQFNSNAPQTAFTRQWNGAGWINPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:567 AA
molecular weight: 61619,54810 Da
isoelectric point:5,01930
aromaticity:0,10229
hydropathy:-0,24515

Domains

Domains [InterPro]
IPR057551
STR
2–78
IPR057551 IPR057552 IPR057549
IPR057551
STR
2–79
IPR057551
ACB97591.1
1 567
Architecture
STR
STR
STR
STR 2-79 | STR 93-217 | STR 232-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACB97591.1
1 567
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,8987
Central domain 290 488 200 0,2386
C-terminal 489 567 78 0,4285
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-488
C-terminal
489-567

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Eps7
[NCBI] 		2886918 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus EPS7
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACB97591.1 [NCBI]
Genbank nucleotide accession
CP000917 [NCBI]
CDS location
range 87643 -> 89346
strand -
CDS
GTGGATGTTGGGGTGGGCGCACCGATAGTTGTTGTGGAAACAACTGGTGAAGCAAGTTACTGTACTATTGAGTTAAAAAGTACAGCCACTGAAGACAGTCCTTGGACTAAATATTATATTGGGGCTTTAGGTTCTACTATTAAATTTGGTGGAGTTCCTATCGGAGACTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGTTACAGTTGATTCTTCAGGATACTACGAGTTTCCTAATATTCTAACTGTAGCTTATAACTTTGTTCCACCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGAATGGGAACGTGGTGCTGGTGCTAACGTTCGTGAGTTCTTGGTTACTTATATAAACTCCGAGGAATACGCTAAAACCGGATGGGCTAAAGCTCAAAAGATAAACGTGGGTGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAACATACCTTTAAGGTTTCATCAATTGCCTGGGGACCAAATAAGCAAGATATAACAGAATCAGCTCCTGTAACATTTATATTGAATGAAGATACTCCTCTAGATAATAGTTTTGTCAATGAGACTGGTATTGATGTTAACTATGCCTTTATTAAGGGTAGTATGAAAGATGGAGAAATCTGGAGACAGACATTCTTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATGAAGAAGGAAAAGCACCTATTTCTTTCGACCCTATAAATCGTGTTGTTAACGTCGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAACTTTATCATGACTAACTTATCTGGTAAAGATAATCCAGCAATTTATACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGTATGGATAATACCTCTGCCAAAGCTAAGTTAGACATTGGTAATGCTACACAATGGATACGTTATGATGGTACTACTCTGCGTATTTCTAGTGGTGTAGTAATTGGAACACCAAATGGTGACGTAGATATTGGAACTGGTTTACAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTTTACCGGCCAAACCGTTAGAACAAGATTATCCACCTCCTGGTTGGTCAAAAACTCCACCTAATCGTACAGATATGACACAAAATATCTATGCGACTACAGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTAGTTCAATGGAGTGGTACTGAAGGTACTATAGGACATGATGGACAGCGTGGTCCTGGGATGTACTCCATGGGTATTCCTGGATTAGGCGGTTGGGATGATGGACAAGCTAACGCATTCTTTCAAAATAACTTTGGAAAACCTCCGGTTAAATACGATGTTCTAACACAATTTAACAGTAATGCTCCACAAACAGCATTTACCCGTCAATGGAACGGGGCTGGATGGATTAACCCTGCAATGGTTCTTCATGGCAACATGATTGTTAATGGAACTGTAACTGCTGATAAGATTGTGGCAGGAAATGCCTTCTTATCACAAATAGGTGTTAATATAATCTACGATAGAAATGCTGCGTTATCAGGAAACCCTGAAGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ada87ed89947ac210bcda479b4c951edf826df68ce047918a205daa088cabbb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification of host receptor and receptor-binding module of a newly sequenced T5-like phage EPS7 Hong,J., Kim,K.P., Heu,S., Lee,S.J., Adhya,S. and Ryu,S. 2008 19025561 GenBank