Protein

View in Explore
Genbank accession
AUR95675.1 [GenBank]
Protein name
coil containing protein
RBP type
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MPLILHHKDPAKIVKHDVYNVESGTNFLDWLCQQWQSSEEMSDGLCVTVLLNGKPIFNSNDDNANEGALDFTIGALDTVSIVNRPADPVTIAYAVVAIVVAVAVSLALAPALPGDAGSQTESPNNRLQSAQNSFRPGEARPEIFGSVVSYPDFIQPTYFEYVNDLKIVYELGYVGEGFFDIGQVRNGETPFNTIPGSSFEVFEPGAVIPQDLLTIHRTADPVDGQVLVAPDDESINQEGEVDSFVGDGTQDIVLTMIEGSTIASDLSLTIGERIRISGGVQFPIEADISNIETVAERTVITLDSMDIIAIAATEIVITHIDENGDPLNYIGYFEIPGEEAEEVWFNWQMPQGLRTESGKQLSIDLEFEIEAIDANDQPTGLIFVKNVTVTDNTLDPLFRTTKFTPAEFPAMIISQYRARVRRLTNQADGAASQQIKMEQFVSVTPYTNLDNSKGTIISWQRRATTFAISTSGNKNNMDVTRRLPTYNRSTGVYDVNNLTATRDFADAAAYKLIVAAGRDVSTVDLAELYAINDGLLHPELGYFDFTFDNKNVGLGERIESICNAARVNPFRDGAVWRFTRDEIKPIRTAMFNRRVTVGNSSKQSWLLQRPDDKDSVALTYVDPDDNVERILYRRIDDSGNIVDDGQGRQALEINLAGCRNFFQAWNRINLEMRRIIYQRRTVNDTTLRDGMIVGLLERVGWVDPNDVTLSSGEILGFSGDVYDTSERFEPVSGESYVVYITDDQGNTSNSVAVTARTDTEFGFIASGLSGAYLASPSGDQLGSRYFIGTASDLTATDFLVTSRKPQADGSVAIELVEYIPQMYELDNANPPQESVTLPNSINSTNATSMPDDAVANIVAGLNGTVTASGGFTTNYVENPTPTIGNSFEAKLTQESGDAIGGAQLGVWLPLTSDVMWTLTEDGAANGSKASVATLEIRDASFNENIGDSTVSMFAIVGGVVSLPNTISVSNTQINTSARTEIRFLSDGTYQEVGFATSTGNYVDTAPGIGSMYEIMATQVSGTTAQGNQLDTWITLGGSSVRWYVEAPRGFNTRSGVLTVQIRAVASPTNTDSSTVTLTASTEL
Physico‐chemical
properties
protein length:1083 AA
molecular weight: 117686,31220 Da
isoelectric point:4,32189
aromaticity:0,08218
hydropathy:-0,17710

Domains

Domains [InterPro]
DC_0118
STR
1–669
DC_0118 DC_0808
NF040662
Unmapped
336–824
NF040662
Coil
Unmapped
413–433
Coil
AUR95675.1
1 1083
Architecture
STR
RBD
STR 1-669 | RBD 682-990 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.210.O._10N.222.52.C2
[NCBI] 		1881406 No lineage information
Host Vibrio sp. F13
[NCBI] 		2070777 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR95675.1 [NCBI]
Genbank nucleotide accession
MG592580 [NCBI]
CDS location
range 31316 -> 34567
strand +
CDS
ATGCCCCTAATACTGCATCATAAAGACCCCGCTAAAATTGTTAAACACGATGTTTACAATGTAGAAAGCGGAACCAACTTCCTAGACTGGCTATGTCAGCAATGGCAATCATCAGAAGAAATGTCTGACGGTCTATGCGTGACTGTGTTACTTAACGGTAAGCCGATATTTAATAGTAATGATGACAATGCTAATGAGGGCGCGCTTGATTTCACTATAGGCGCATTGGATACAGTCTCTATTGTTAATCGACCTGCTGACCCTGTAACCATTGCTTATGCTGTTGTAGCGATTGTTGTTGCTGTTGCGGTATCGCTTGCATTAGCTCCTGCATTGCCTGGCGATGCTGGCTCACAAACTGAGTCACCAAATAACCGATTGCAATCAGCGCAGAATAGCTTTAGACCAGGCGAGGCTAGGCCAGAGATATTTGGCAGCGTAGTTAGTTACCCTGATTTTATTCAGCCGACTTATTTTGAATACGTTAACGATCTTAAAATTGTTTATGAACTTGGCTACGTTGGAGAGGGATTTTTTGATATTGGTCAGGTGAGAAACGGTGAAACTCCATTTAATACAATACCTGGCTCATCATTCGAAGTGTTTGAACCTGGCGCGGTTATCCCTCAGGATTTATTAACTATTCATCGCACTGCCGATCCTGTTGATGGGCAAGTGCTAGTTGCGCCTGATGATGAATCAATTAACCAAGAGGGTGAGGTTGATTCGTTTGTCGGTGACGGAACTCAAGATATTGTGCTAACCATGATTGAAGGCAGTACCATTGCTAGTGATTTATCATTAACGATTGGTGAACGAATTCGTATTAGCGGCGGGGTTCAATTCCCAATTGAGGCAGACATATCGAACATTGAAACCGTAGCTGAAAGAACGGTGATCACATTAGATTCAATGGATATTATTGCCATTGCTGCGACTGAAATTGTAATCACTCATATTGATGAGAATGGCGATCCGTTAAATTACATAGGTTACTTTGAAATCCCAGGCGAAGAGGCCGAAGAAGTTTGGTTTAATTGGCAGATGCCTCAAGGGTTAAGAACTGAAAGCGGCAAGCAGTTATCAATTGATTTAGAGTTTGAGATTGAAGCTATTGACGCTAACGATCAACCTACTGGTTTAATATTCGTTAAAAATGTAACGGTAACAGATAACACATTAGACCCGTTGTTTAGGACCACTAAATTTACCCCTGCTGAATTCCCAGCGATGATCATCTCTCAATATCGTGCAAGGGTAAGAAGATTGACCAATCAGGCCGACGGCGCAGCAAGCCAGCAAATCAAGATGGAGCAATTTGTTTCTGTCACTCCTTATACAAATTTGGATAACTCCAAAGGCACTATTATTTCTTGGCAGCGTAGAGCAACTACTTTTGCAATCTCGACTAGTGGCAATAAAAATAACATGGACGTAACCAGACGATTACCAACATATAATCGATCCACTGGCGTTTATGATGTTAATAACCTTACTGCAACTCGTGACTTTGCCGACGCTGCAGCATATAAGTTAATTGTTGCTGCTGGCCGTGATGTATCAACTGTCGACCTTGCAGAGCTGTACGCGATTAATGATGGCCTATTGCATCCTGAGCTTGGTTATTTTGATTTCACCTTTGACAATAAAAATGTGGGATTAGGTGAGCGAATAGAATCAATCTGTAATGCGGCTAGGGTTAACCCGTTTCGTGATGGCGCAGTGTGGCGCTTTACTCGTGACGAGATAAAACCTATCCGTACAGCAATGTTTAACCGCCGTGTGACTGTTGGAAACTCAAGCAAACAATCTTGGTTGCTTCAGAGACCTGATGATAAAGATTCTGTTGCGCTAACGTATGTTGATCCAGATGATAACGTTGAGCGCATTCTTTATAGACGCATTGATGATAGCGGCAATATTGTTGATGATGGCCAAGGCAGACAAGCACTAGAAATTAATCTTGCTGGCTGCCGTAACTTCTTTCAAGCGTGGAACAGGATTAACCTTGAAATGCGCCGCATCATATACCAGCGCAGAACGGTAAACGATACAACCTTGCGCGATGGCATGATTGTTGGACTACTTGAGCGTGTTGGCTGGGTTGATCCTAACGATGTCACCTTGTCATCTGGCGAGATACTTGGGTTTAGTGGTGATGTTTACGATACTAGCGAACGCTTTGAGCCTGTTAGCGGTGAAAGCTATGTTGTTTATATTACTGACGACCAAGGAAACACTAGCAACTCAGTGGCCGTAACTGCTCGTACTGATACAGAGTTTGGTTTTATTGCTTCAGGTCTTTCTGGCGCCTACCTTGCCTCGCCAAGTGGTGATCAACTAGGCAGTCGTTATTTTATTGGCACAGCTAGCGATTTAACTGCGACTGACTTTTTAGTGACATCAAGAAAACCACAAGCTGATGGCAGCGTTGCTATTGAGCTAGTGGAATACATCCCGCAAATGTACGAGCTAGATAATGCTAATCCGCCTCAAGAATCGGTTACATTGCCAAACAGTATTAACTCAACTAATGCCACATCAATGCCTGATGATGCAGTGGCTAATATTGTTGCCGGTCTTAACGGAACGGTTACGGCTAGCGGTGGATTTACTACTAACTATGTTGAAAATCCAACACCAACAATTGGCAATAGCTTTGAAGCTAAGCTAACTCAAGAAAGTGGTGATGCTATCGGCGGGGCTCAATTAGGAGTGTGGCTACCGTTGACATCGGATGTTATGTGGACGCTTACAGAAGATGGTGCAGCCAATGGAAGTAAAGCAAGTGTTGCAACGCTAGAAATTAGAGACGCATCATTTAACGAAAACATTGGCGACTCAACAGTTTCTATGTTTGCCATTGTAGGTGGCGTGGTTTCATTGCCTAACACTATATCTGTATCGAATACACAGATAAACACTAGTGCTAGAACTGAAATTAGATTCCTATCTGACGGCACTTATCAGGAGGTTGGCTTTGCAACATCTACCGGTAACTATGTTGATACAGCGCCTGGTATTGGTTCCATGTATGAGATTATGGCGACTCAAGTTAGCGGGACAACCGCCCAAGGTAACCAGCTTGATACGTGGATCACCTTAGGCGGTTCAAGTGTTCGTTGGTATGTTGAAGCGCCTAGAGGTTTCAATACTAGAAGTGGAGTATTAACGGTTCAAATTAGGGCGGTTGCAAGCCCGACTAATACAGATAGTTCGACCGTTACGCTTACTGCTTCAACTGAGTTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5f52f26f39a90a8dca11d2f431daed88083f120145827f33dd7d1179d7b09966
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2795
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank