Protein

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Genbank accession
XOF09909.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAIVGVPGWIGESAVNETGQRWMDAAMRAVRVSVPGWMSSMAGQSKEVYYSIGASNSYNKDTLINYLKSQGSTPVVVTITGNLVSSSAGQPCLDFPSSLTNAYVTLIINGGVTVYGRGGRGAQAGNQAGEAGGTAINNGIGTRLRITNNGAIAGGGGGGGGWSVDYNFTLAGVAGGGGGRPFGTGGRGGRGNGGNASLTAAGGKVTVDGNNMSGAGGNVGAAGGAAVRTSNYNASGAGAAGKAVTGNAPTWTKVGTIYGSRV
Physico‐chemical
properties
protein length:262 AA
molecular weight: 25533,95000 Da
isoelectric point:9,94194
aromaticity:0,06489
hydropathy:-0,07977

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–143
DC_2135
XOF09909.1
1 262
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-143 | RBD 144-262
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SH-2
[NCBI] 		3390848 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOF09909.1 [NCBI]
Genbank nucleotide accession
PQ642267.1 [NCBI]
CDS location
range 53146 -> 53934
strand +
CDS
ATGGCAATTGTAGGTGTTCCTGGCTGGATTGGTGAATCTGCCGTGAATGAAACTGGACAACGTTGGATGGATGCTGCGATGAGAGCAGTTCGTGTTTCAGTTCCTGGTTGGATGAGCTCAATGGCCGGACAATCTAAAGAAGTATATTACAGCATTGGTGCTAGCAATTCTTATAATAAAGACACACTAATAAATTATCTCAAATCTCAAGGTAGTACTCCTGTTGTTGTTACTATTACTGGTAACTTAGTTTCTTCATCTGCCGGGCAACCTTGCTTAGATTTTCCTAGTTCATTAACTAATGCTTATGTAACGCTTATTATAAATGGCGGTGTAACAGTATATGGTCGCGGAGGACGCGGCGCGCAAGCGGGAAACCAGGCGGGTGAAGCTGGTGGTACTGCGATTAATAATGGTATTGGTACACGCTTACGTATTACGAACAATGGTGCAATCGCTGGCGGTGGCGGCGGTGGCGGCGGTTGGTCAGTAGACTATAACTTCACATTAGCAGGCGTTGCTGGCGGCGGTGGTGGTCGTCCGTTCGGTACTGGTGGTCGTGGTGGTCGTGGTAATGGCGGTAATGCATCGTTAACCGCCGCAGGTGGTAAAGTAACTGTTGATGGTAATAACATGAGTGGTGCAGGTGGTAACGTTGGCGCTGCTGGCGGCGCTGCTGTTCGTACATCAAACTATAACGCCAGCGGTGCGGGTGCAGCAGGTAAAGCTGTTACTGGTAATGCTCCAACTTGGACTAAAGTTGGTACAATATATGGTTCAAGAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d760d7f7cee4c497fccaf89f9f708fb28dd9fb6a941bc4ab7126932ff81d7004
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50