Protein

View in Explore
Genbank accession
WWQ71639.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MKARRYYPGRAVATGISSTLYNLPARLARAFSCPEESMGAVHQHLAGRKGGSSKPKQPSIARDSLQSVATAKLLLAVGEGEFAEGPSDQDIYLDNTPLMDASGNVNFPNVKWEWRSGSVDQDYIPGIPSVENETTVNVELRSDTPWVRSVTNAQLSAVRLRFAWPALQKQESSGDVTGYRIEYAVDVSTDGGAYQQVLLDAVDGKTTSRYERSQRIDLPAATTGWQVRVRRITPNQNSSLIADTMLIAGLTEVIDAKLRYPNTALLYIEFSAEQFSNIPAVTVECKARKVQVPTTYDPELRTYTGVWDGSFKSAWTNNPAWITYDISTNARFGLGKRIKPWMVDKWELYKIAQYCDQLVPDGKGGQEPRFLCDLNLQSRSQAWTLLRDIAAIYRGMSYWAQGQLVSQADMPRTADFDYVFTRANVIDGKMTYGAASARTRYSRALVSYDNPANNYDTDVTGYSDAPLLRRYGDNPVELSAIGCTRESEAQRRGKWAVLTSVQDRTITFATGMEGRIPLPGYIIPVADSLLAGREIGGRISAVAGRVVTLDRVTQVKAGDRLIINLPSGRAEGRTVQSVNGKAVTVTAAYSETPEPELCWALDADDLAVQLYRVMSTKRDDNGQWTINGLQYEPSKFDHIDTGARLEERPISIIPVTTVQPPASVTLSSRWTIDQGLAVSTMTITWPAVEGAVAYDVEWKKDSGNWIRLPRTGTTSVDVTGIYAGGYLARVRAVSAFDITSVWKSSILTQLSGKTGAPPALAFLRTTSGPWKIGLEWGFPASGAADTAYTEIQQSVTPGGSEQNATALGLFAYPTDTHTLTSLAAGARLAFRGRLIDRTGNVGPWSAWVDGISSTDASEYNELITKEYVESALGEQFFADIDQMQVDITGLQDQIDNLTDVLAYDPTKTYAKNDIVRVGSRLYQAKQAVPLNASPPNATYWADIGQSIETANGLAQQVATNTADITELDGKVEAAASSLDVLQAVARREPATGEKADALKGWDTIARAATEVTVRANEDEAQAKRTSLLEARTGTAEGRIATVESVVASNNAVTVQRLDQLSGQVASNASAISTEQTVRANADSALGQRVDTVSARTDANEANIQTTSQAVTSLDGNVKALYSVKLQAHANGQKYAAGWQLGFDSGTSVTTMAFQADRFLWFNSSSGQTVAPVSIVGGQMFINNAMIQDGSITNAKIGNVIQSTALGANGEPLWKLDKGGAFTMNSATSGGFMRQTAEAIKVYDGNLVLRVQIGNLDV
Physico‐chemical
properties
protein length:1257 AA
molecular weight: 136098,64490 Da
isoelectric point:5,27343
aromaticity:0,07876
hydropathy:-0,27518

Domains

Domains [InterPro]
DC_0014
STR
17–1257
DC_0014
IPR053171
Unmapped
42–982
IPR053171 IPR015406
IPR055385
ATT
130–256
IPR055385 IPR036116 Coil
WWQ71639.1
1 1257
Architecture
STR
ATT
STR
STR 17-129 | ATT 130-256 | STR 257-1257
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Alize
[NCBI] 		3096999 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWQ71639.1 [NCBI]
Genbank nucleotide accession
OR683400.1 [NCBI]
CDS location
range 32582 -> 36355
strand +
CDS
ATGAAGGCACGACGCTACTACCCCGGTAGGGCGGTTGCCACTGGAATTTCATCCACGCTGTACAACCTTCCAGCCCGCCTCGCGCGGGCTTTTTCATGCCCGGAGGAAAGCATGGGCGCAGTTCACCAGCACCTGGCCGGCCGCAAGGGCGGCAGCAGCAAGCCCAAGCAACCGTCGATCGCGCGCGACAGCCTGCAGTCGGTGGCCACCGCCAAGCTTCTGCTGGCGGTGGGCGAGGGCGAGTTCGCCGAGGGGCCGAGCGACCAGGACATCTACCTGGACAACACCCCGCTGATGGACGCCAGCGGCAACGTCAACTTCCCCAACGTGAAGTGGGAATGGCGCAGCGGCAGTGTCGATCAGGACTACATCCCCGGCATCCCCTCGGTGGAGAACGAGACCACGGTGAACGTGGAGCTGCGCAGCGACACTCCGTGGGTGCGTTCGGTGACCAACGCCCAGTTGTCCGCCGTGCGCCTGCGCTTCGCCTGGCCGGCCCTGCAGAAGCAGGAGAGCAGCGGGGACGTGACGGGCTACCGGATCGAGTATGCCGTAGATGTCAGCACCGACGGCGGCGCCTACCAGCAGGTGCTGCTGGATGCTGTCGACGGCAAGACCACCAGCCGCTATGAGCGGAGCCAGCGCATCGACCTGCCGGCGGCGACCACTGGCTGGCAGGTGCGCGTGCGCCGGATCACGCCGAACCAGAACAGCAGCCTGATCGCCGACACCATGCTGATCGCAGGTCTGACTGAGGTGATCGACGCGAAGCTGCGCTACCCAAACACAGCTCTGCTCTACATCGAGTTCAGCGCAGAGCAGTTCAGCAACATTCCGGCCGTCACCGTCGAGTGCAAGGCCCGCAAGGTCCAAGTGCCGACCACCTACGACCCGGAGCTGCGCACGTACACCGGCGTCTGGGATGGCAGTTTCAAGAGCGCCTGGACCAACAATCCTGCGTGGATCACCTACGACATCAGCACCAACGCGCGCTTCGGCCTGGGCAAGCGGATCAAGCCCTGGATGGTGGACAAGTGGGAGCTCTACAAGATCGCCCAGTATTGCGACCAATTGGTGCCAGACGGGAAGGGCGGCCAGGAGCCGCGCTTTCTGTGCGATCTGAACCTGCAGTCGCGCTCCCAGGCATGGACGCTGCTGCGGGATATCGCGGCGATCTATCGGGGGATGAGCTATTGGGCGCAGGGCCAGCTTGTGTCGCAGGCCGACATGCCGCGCACTGCCGACTTCGACTACGTGTTCACCCGGGCGAATGTGATTGACGGGAAGATGACCTACGGCGCCGCCTCGGCTCGCACCAGATACAGCCGCGCCCTGGTCAGCTACGACAACCCGGCGAACAACTACGACACCGACGTGACGGGCTATTCCGACGCGCCGTTGCTGCGTCGCTATGGCGACAACCCGGTGGAGCTGTCTGCCATCGGATGTACGCGAGAGAGCGAGGCGCAGCGGCGCGGAAAGTGGGCGGTGCTGACCAGCGTGCAGGACCGCACCATCACCTTCGCCACCGGTATGGAAGGCCGGATTCCGCTGCCGGGCTACATCATCCCGGTGGCTGACTCTCTGCTGGCCGGCCGCGAGATTGGCGGCCGGATCTCGGCTGTTGCTGGCCGCGTGGTAACGCTCGATCGCGTCACTCAAGTCAAGGCCGGTGATCGCCTGATCATCAACCTGCCGAGCGGGCGCGCCGAGGGCCGGACGGTGCAGTCGGTCAACGGCAAGGCCGTCACCGTCACCGCGGCCTACTCGGAGACGCCGGAGCCGGAACTGTGCTGGGCGCTCGACGCCGATGACCTGGCTGTCCAGCTCTATCGGGTGATGAGCACCAAGCGTGACGACAACGGCCAGTGGACCATCAACGGCCTGCAGTACGAGCCGAGCAAGTTCGACCACATCGATACCGGCGCACGGCTGGAGGAGCGCCCGATCAGCATCATCCCGGTCACCACCGTGCAGCCACCGGCCAGCGTCACGCTCTCGTCGCGCTGGACAATCGACCAGGGGCTGGCGGTGAGCACCATGACGATCACCTGGCCGGCAGTGGAGGGCGCCGTCGCCTACGACGTGGAGTGGAAGAAGGACAGTGGAAACTGGATCCGCCTGCCGCGTACCGGCACCACCAGCGTCGATGTGACTGGCATCTACGCAGGTGGCTATCTGGCGCGGGTGCGCGCGGTGTCGGCCTTCGACATCACGTCGGTCTGGAAGAGTTCGATCCTGACCCAACTCAGCGGTAAGACCGGCGCGCCGCCGGCGCTGGCGTTCCTGCGTACCACCAGCGGACCGTGGAAGATCGGCCTGGAGTGGGGATTCCCGGCCAGTGGCGCGGCGGACACCGCCTACACCGAGATCCAACAGTCGGTTACCCCGGGCGGCAGCGAACAGAACGCAACTGCCCTGGGCTTGTTCGCGTACCCGACCGACACCCACACGCTGACCTCGCTGGCGGCCGGCGCTCGCCTGGCCTTCCGCGGGCGGCTGATCGACCGGACAGGCAACGTCGGCCCCTGGTCGGCCTGGGTCGACGGTATAAGCTCGACGGATGCGAGCGAGTACAACGAGCTGATCACCAAGGAGTACGTCGAGTCCGCGCTGGGCGAGCAGTTCTTCGCCGACATCGATCAGATGCAGGTCGATATCACTGGCCTGCAGGACCAGATCGACAATCTGACCGATGTGCTGGCCTACGACCCGACGAAGACCTACGCGAAGAACGATATCGTGCGGGTCGGCAGCCGGCTGTATCAAGCGAAGCAGGCGGTGCCGCTCAACGCCTCGCCGCCGAACGCGACCTACTGGGCCGACATCGGACAGTCGATCGAGACGGCCAACGGCCTGGCCCAGCAGGTGGCCACCAACACCGCGGATATCACCGAGCTCGACGGTAAGGTCGAAGCGGCGGCTTCGAGCCTGGATGTTCTGCAGGCTGTCGCCCGCCGGGAGCCGGCGACCGGAGAGAAGGCCGATGCGCTGAAGGGCTGGGACACCATTGCTCGAGCCGCCACCGAAGTCACCGTGCGGGCGAACGAGGATGAAGCGCAGGCGAAGCGGACGAGCTTGCTTGAAGCGCGTACCGGGACCGCGGAGGGCAGGATCGCCACCGTGGAGTCGGTCGTTGCGTCGAACAATGCCGTGACCGTCCAGCGGCTGGACCAGCTATCCGGCCAGGTTGCGAGCAACGCCTCGGCCATCAGCACCGAACAGACCGTCCGCGCCAACGCGGACAGCGCCCTGGGGCAGCGGGTGGATACCGTCAGCGCGCGCACCGATGCCAACGAAGCGAACATCCAGACCACATCTCAAGCGGTTACCTCGCTGGATGGCAACGTCAAGGCGCTCTACAGCGTGAAGCTCCAGGCGCATGCCAACGGACAGAAGTACGCCGCTGGCTGGCAACTGGGCTTCGACAGCGGTACGAGCGTGACGACCATGGCGTTCCAGGCCGATCGGTTCCTCTGGTTCAACAGTTCCAGCGGGCAGACCGTGGCGCCGGTCTCGATCGTCGGCGGCCAGATGTTCATCAACAACGCGATGATCCAGGACGGCTCGATCACCAACGCGAAGATCGGCAACGTGATTCAGTCGACCGCCCTCGGTGCCAACGGCGAGCCGCTGTGGAAGTTGGATAAGGGCGGCGCGTTCACAATGAACAGCGCAACGTCGGGAGGGTTTATGCGCCAGACGGCAGAGGCAATAAAAGTGTATGACGGAAACTTGGTGCTTCGAGTCCAGATCGGGAATCTTGATGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
42e2cb99f4eb3c2dafdb5897b5d724bf94f20db2630dd2d115248af6916982a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7474
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages of P. aeruginosa: insights into their role through their activity, abundance and persistence Kyrkou,I., Bartell,J.A., Lechuga,A., Lood,C., Lavigne,R., Molin,S. and Krogh Johansen,H. 2024-01-16 — GenBank