Protein

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Genbank accession
XMN01884.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLNNLNQPKGSTIGVLRDGRTVQEAFDSLMYTEVLLKTGKENAESNRAALQAAADSTKLLAVPAGEYYLSSHVTLRTGNVIVGRGASAFSSGYTRLVCETPGEGIFWYTGDTSTGQKRMPQVYNMGLKGDYPIRFNDERTAIIADQGASNVPYGMVPVVQFCTIDPLTNGVGIGISASKMFDGVFSFNEIANFDTGVLLNGCDLMFVAHNRIRNAYKYMVLELGIGTFGSQNEIYHNDILHAGSPDCIFIKSTARHVRIYDNYLEQASGTSGQALIGFIDASAVDAPSFNGNAPAVRASTIIKDNRIDGQHFAKYFVYKYQTSSQTYGVIEDVSTVGPNTGLGSNHLVLVDASGNTVDRVPFLYNSVQPCSFRFSGPRFGKWNGYSSVSDFSLKLTGSNMSMWGTSLGGNNLKDYLYARGNSLILTNGFTAAAVLQFPVGTLVRPSSQYAIKVTAKCSSGSETLTFAGVANGVGQTSVSMQLSTEPTSATTQFTSGSTQSGFSLGRSSNGADIEILAIEFIKLYSLEYSVVADTGATTVYRGSGDVVISASGNLQFPAYVVLRYIGGSLKEVYKSVTDAAVIDITWSVSGQTLTVNITGSGGGKRFSVTQEEV
Physico‐chemical
properties
protein length:613 AA
molecular weight: 65508,74870 Da
isoelectric point:6,03360
aromaticity:0,09951
hydropathy:-0,04078

Domains

Domains [InterPro]
DC_0953
STR
1–398
DC_0953
IPR012334
STR
18–368
IPR012334
Coil
Unmapped
40–60
Coil DC_0556
IPR011050
STR
47–355
IPR011050
XMN01884.1
1 613
Architecture
STR
RBD
STR 1-398 | RBD 399-613
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XMN01884.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 43 43 0,9592
Central domain 44 382 340 0,9883
C-terminal 383 613 230 0,9893
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-43
Central
44-382
C-terminal
383-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage pK2420
[NCBI] 		3387285 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XMN01884.1 [NCBI]
Genbank nucleotide accession
PQ589833.1 [NCBI]
CDS location
range 16140 -> 17981
strand +
CDS
ATGTTAAACAATCTGAATCAGCCGAAAGGCTCAACCATTGGTGTGCTCAGGGATGGGCGCACCGTCCAAGAGGCATTCGACTCACTGATGTACACAGAGGTCTTACTGAAGACTGGTAAGGAGAACGCTGAATCAAACAGGGCTGCCCTTCAGGCCGCAGCGGATTCCACTAAGTTACTGGCGGTACCGGCTGGTGAGTACTACCTATCGTCCCACGTAACCCTCCGCACTGGCAACGTCATAGTAGGACGCGGAGCCAGCGCATTCTCTTCAGGATACACACGGTTAGTATGCGAGACTCCGGGTGAGGGCATATTCTGGTACACTGGCGACACCTCCACTGGGCAGAAGCGGATGCCGCAGGTGTACAATATGGGACTGAAGGGTGACTACCCTATTCGGTTCAATGATGAGAGAACGGCAATCATAGCAGACCAAGGGGCGTCAAACGTCCCGTATGGCATGGTTCCTGTAGTTCAGTTCTGCACAATCGACCCACTAACCAACGGTGTCGGTATTGGTATATCAGCGTCCAAAATGTTTGATGGCGTGTTCTCGTTCAACGAAATTGCCAACTTTGACACAGGTGTCCTCCTCAACGGGTGTGACCTTATGTTCGTTGCCCATAACCGTATCCGTAACGCCTATAAGTACATGGTGTTGGAGCTTGGTATTGGGACATTCGGCTCACAGAACGAGATTTATCACAACGACATTCTCCACGCTGGGTCGCCAGACTGTATCTTCATAAAGTCAACAGCTCGGCATGTGCGCATCTACGACAACTACCTTGAGCAGGCGTCCGGTACAAGCGGTCAGGCCCTTATCGGGTTCATTGATGCCTCAGCGGTTGACGCGCCGTCATTCAACGGGAACGCACCAGCTGTACGTGCCTCTACCATCATAAAGGACAACCGTATAGATGGTCAGCATTTCGCTAAGTATTTCGTGTACAAATACCAGACGTCTAGTCAGACATATGGTGTCATTGAGGATGTGTCGACGGTAGGTCCAAACACAGGCTTGGGGTCAAACCACTTGGTTCTTGTCGACGCTTCTGGTAATACCGTCGATAGGGTGCCGTTCCTGTACAACTCAGTACAGCCGTGCTCCTTCCGCTTTTCTGGCCCCCGCTTCGGTAAGTGGAATGGGTATAGCTCTGTGAGCGACTTTTCATTGAAACTCACTGGTTCAAACATGTCCATGTGGGGTACTTCTCTGGGCGGTAACAACCTTAAGGATTACCTATACGCACGTGGTAACTCGCTCATTCTAACGAACGGCTTCACAGCAGCGGCTGTTCTACAGTTCCCGGTGGGTACACTGGTTCGCCCGTCCTCGCAGTATGCCATCAAGGTTACCGCGAAGTGTTCGTCTGGAAGTGAGACACTGACGTTTGCTGGTGTTGCTAACGGTGTTGGTCAGACAAGCGTATCGATGCAGCTGAGCACTGAGCCAACGAGCGCCACAACCCAGTTCACCTCCGGCTCCACTCAGAGTGGTTTCTCACTGGGACGCTCCAGCAACGGTGCGGACATTGAGATACTGGCTATTGAGTTTATCAAGCTGTACTCTCTAGAATACTCGGTGGTTGCTGACACAGGTGCGACTACGGTATACCGTGGGTCTGGAGACGTGGTTATTTCAGCCTCTGGAAACCTGCAATTCCCGGCGTACGTAGTTCTTCGGTATATTGGAGGCAGTCTCAAGGAAGTGTACAAGAGTGTTACTGACGCTGCTGTTATTGACATTACGTGGTCCGTATCCGGCCAGACTCTTACCGTCAACATTACGGGGAGCGGTGGTGGTAAGCGGTTCTCCGTTACGCAGGAGGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ed1a26ff6d8b24883383fd1d51d9e5f93a52c7b00914aabe73e7ce6ff9843b8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6615
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50