Protein

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Genbank accession
QQO88953.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRSGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTASGKFYAGEQSRSPWDIVGEVVADDVRPVYWQDLTDDQKAQAADKYHNGEGTPDQFIVINGDVYDLDADAAVYEVEGLKGHVRILESSKADGAALAVQCVDGWRVISVYRVQVTS
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19347,49970 Da
isoelectric point:5,19749
aromaticity:0,10920
hydropathy:-0,26552

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_BPS4
[NCBI] 		2801549 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO88953.1 [NCBI]
Genbank nucleotide accession
MW355476.1 [NCBI]
CDS location
range 13284 -> 13808
strand -
CDS
ATGAAACTGAATATTACCGCGCCGGGCCTTTTCTTTAATCGTAGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAGAGAATAGCGCCGGGGCCGTCGTGTCATTCCCTGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAGTTTAAGATCTGGACGGCATCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCGCCGTGGGATATTGTCGGCGAGGTTGTCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGCAAGCCGCCGACAAATATCACAATGGTGAAGGCACGCCGGATCAATTCATCGTGATAAATGGCGACGTTTACGATCTGGACGCCGACGCGGCCGTTTATGAGGTGGAAGGGTTAAAAGGTCATGTGCGCATACTGGAAAGCTCAAAGGCGGACGGGGCCGCGCTGGCGGTGCAATGTGTGGACGGCTGGCGGGTAATAAGCGTTTACCGCGTACAGGTGACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
15928f15935d16d8233958eb2e8558669ab31f165bb828596f61eb2bc8fcfe56
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterisation of bacteriophages with activity against invasive non-typhoidal Salmonella causing bloodstream infection in Malawi Rodwell,E.V., Wenner,N., Pulford,C.V., Cai,Y., Bowers-Barnard,A., Beckett,A., Rigby,J., Picton,D., Blower,T.R., Feasey,N.A., Hinton,J.C.D. and Perez-Sepulveda,B. — — GenBank