Protein

View in Explore
Genbank accession
XCO38046.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MNNTINHVSDKSVYVTFDPAGTQWPSTFHNVQQALAAIGPWARTDVGLPNAAPGVRGIAAIATQAMIDAGTDTQTIVTPALLEYRLQNPHASQTVWGYTRYATDAESVTVTNDLVSLTPRSLNYVFNTRQAKENVWGSAKLSTTAQATSGTDDTTAMTPLKVKQAISALVPVQANATESSFGLVQLATVAEVRAGTIRDGFAISPYTFIRLTASESDLGLLRIATQAEVNAGTDNTKAITPQKLAAVKGSGSTFGMVKLTTDINAGLANTALSAGANVVPSNKNSAITGGALYQGSISADNKYQTKTDVDANIPIGCMMLAAFNADVGNLFICNGRAMNRNSNPELFARIGYTYGGSGDIFNLPDMRGLVARGFDGGRGVDTGRGFGTYQADMFAYHEHDLQMIYQNGGNLPKSQAVYELKGAEKNDQRVMHLNNDYSKALGTGGNETRMKNLAVNYVIRVR
Physico‐chemical
properties
protein length:462 AA
molecular weight: 49158,57710 Da
isoelectric point:7,72501
aromaticity:0,07359
hydropathy:-0,20519

Domains

Domains [InterPro]
DC_0176
STR
1–440
DC_0176
IPR037053
ATT
302–367
IPR037053
SSF88874
STR
304–461
SSF88874
IPR011083
ATT
316–370
IPR011083
XCO38046.1
1 462
Architecture
STR
ATT
STR
STR 1-301 | ATT 302-370 | STR 371-461 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146010
[NCBI] 		3232194 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38046.1 [NCBI]
Genbank nucleotide accession
PP889464 [NCBI]
CDS location
range 171793 -> 173181
strand +
CDS
ATGAACAATACAATTAACCACGTAAGCGATAAATCCGTTTACGTGACATTTGATCCTGCTGGTACGCAATGGCCTAGCACGTTTCATAACGTACAACAGGCATTAGCCGCTATTGGGCCGTGGGCGCGTACTGATGTTGGTTTGCCTAATGCCGCGCCTGGTGTGCGCGGTATTGCTGCTATTGCTACACAGGCAATGATTGATGCGGGTACAGACACCCAGACGATCGTAACTCCTGCTTTGCTGGAATACCGTCTGCAAAACCCTCATGCATCACAAACCGTATGGGGTTACACCCGTTACGCAACTGATGCAGAATCAGTAACAGTAACAAACGATCTGGTTTCTCTTACTCCGCGCTCGTTGAACTATGTGTTTAACACCCGCCAGGCAAAAGAAAACGTTTGGGGTTCTGCGAAACTGTCAACAACTGCTCAGGCAACGTCCGGTACTGATGACACTACCGCAATGACTCCGCTTAAAGTGAAGCAAGCGATCTCTGCTCTGGTTCCTGTACAGGCAAACGCAACAGAAAGTTCGTTTGGTTTGGTTCAGTTAGCAACTGTTGCAGAAGTTCGCGCGGGTACTATTCGCGATGGGTTTGCGATTTCACCATACACGTTTATTCGTCTGACTGCAAGCGAAAGTGATTTAGGTTTACTCCGTATCGCTACCCAGGCAGAAGTAAACGCGGGTACTGATAACACCAAAGCGATCACCCCGCAAAAACTCGCTGCTGTGAAGGGTTCCGGCTCTACTTTCGGTATGGTTAAATTAACAACAGATATCAATGCCGGATTAGCGAATACTGCTTTGTCTGCTGGTGCTAACGTAGTACCGAGCAACAAAAACAGTGCAATTACTGGTGGTGCATTGTATCAGGGTTCGATTAGTGCTGACAATAAATACCAGACAAAGACAGATGTTGACGCAAATATCCCGATCGGATGCATGATGCTTGCAGCGTTTAACGCCGATGTTGGTAACTTGTTTATCTGTAACGGGCGAGCGATGAACCGCAATTCAAACCCAGAACTGTTTGCCCGAATTGGTTATACATACGGCGGTTCTGGTGATATTTTCAACTTGCCTGATATGCGCGGTCTTGTAGCTCGCGGCTTTGATGGTGGGCGTGGTGTGGATACAGGTCGCGGTTTTGGTACATATCAGGCTGATATGTTTGCGTATCACGAACATGATCTCCAGATGATTTATCAGAACGGCGGCAATCTTCCTAAGAGTCAAGCAGTTTATGAACTGAAAGGCGCGGAAAAAAATGACCAACGTGTTATGCACCTGAATAACGATTACAGCAAAGCATTAGGTACTGGCGGAAACGAAACGCGAATGAAAAACCTTGCGGTCAACTACGTAATTCGAGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cdf8f9ef6d83a568997abcfdc746d6b1a6f7c9b29b0aedd2827bdbc7f8c62d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank