Protein

View in Explore
Genbank accession
WBF04892.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MLEAILLGKKNGFVPGEQPYIGYNFEKGLSTGKQVISLTNLIASDVVTPPVALSGYSKALFTGTKQFPIIPLTSMDVGTGDFTIEFPFYCTQTSNGYTTLMYQRPNTSSWGGLIIRFGDNGYGNRLQVSTQPDIGNSNYSTSTTRATGTNRWIHFVMQRRNGKISVYLNGVKQGLAVFTGSDYSLTERDSLTNIAASTIFQIGDGTASNLYIPEFACYRKARYSANFTPSFPIAA
Physico‐chemical
properties
protein length:235 AA
molecular weight: 25667,67530 Da
isoelectric point:9,16484
aromaticity:0,12340
hydropathy:-0,15872

Domains

Domains [InterPro]
DC_2085
STR
25–230
DC_2085
G3DSA:2.60.120.200
STR
42–230
G3DSA:2.60.120.200
IPR013320
STR
56–223
IPR013320
PF13385
LEC
74–222
PF13385
WBF04892.1
1 235
Architecture
STR
STR 25-230 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF04892.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9474
Central domain 18 216 200 0,2813
C-terminal 217 235 18 0,6506
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_Ea277G
[NCBI] 		3016906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF04892.1 [NCBI]
Genbank nucleotide accession
OP991903.1 [NCBI]
CDS location
range 187474 -> 188181
strand +
CDS
ATGTTAGAAGCCATACTCCTCGGTAAGAAGAACGGATTTGTTCCGGGTGAGCAGCCCTATATCGGTTATAATTTCGAGAAAGGACTATCGACCGGCAAACAGGTTATCAGTCTCACTAACCTGATTGCTAGTGATGTGGTCACACCACCGGTAGCCCTTTCGGGGTACAGTAAAGCACTGTTCACGGGAACCAAACAGTTCCCCATCATCCCGTTGACGTCAATGGATGTAGGGACCGGGGATTTCACGATTGAATTTCCTTTCTATTGTACCCAGACCAGTAATGGTTATACGACTTTGATGTACCAACGCCCGAATACATCCAGTTGGGGCGGATTAATCATTCGCTTTGGGGATAACGGGTACGGTAACCGCTTACAGGTTTCGACCCAACCTGATATAGGTAACTCGAACTACTCAACCAGTACAACGCGAGCAACCGGGACCAATCGCTGGATACATTTCGTCATGCAGCGACGTAACGGGAAAATCTCCGTCTACCTGAATGGGGTGAAACAAGGATTGGCGGTATTCACGGGGAGCGATTACAGCCTGACTGAACGGGACTCGTTGACTAACATTGCGGCGTCAACCATCTTTCAGATTGGCGATGGTACTGCTTCCAACCTTTATATCCCGGAGTTTGCCTGCTATCGCAAGGCAAGGTATAGCGCCAACTTCACACCTTCCTTTCCCATCGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0106f99bcd4fcf3b323ab8e84cbb95844992c609802f53035d09e34102a1f330
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Erwinia Amylovora phage vB_Ea277G Renteria-Soto,D.L., Romo-Chacon,A., Rios-Velasco,C., Olivas,G.I. and Berlanga-Reyes,D.I. 2023-07-17 — GenBank