Protein

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Genbank accession
XRA41605.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MKTILTYLFRTDRTYVVSFEYLTRRFVKVFLLGQNGKRELILGTDFKFISSTEIQTTLAWPNGEPWETLEIRRVTSATDRLVDFNDGSILRANDLNVSQLQAIHIAEEARDSAADNLSVDRDGNYDARNRRIVNLAAGQDDRDAVNMEQIRDIRNTIGETWRALKPSPGPLQPATRDNGEPLQLGDTWMESTSGVSFVYGPSGWRAVNVDMTLLGGPDGAALIGVQFTKKSAPIRTLADYIAASEVNIWLHADRVTERPDPLNPDTWDWTPAFQYAADLGGSVFAPAGRYIISTVLMGKSLRINCEPGVVFYQKDGSIRKVNMWSQGTSMFEQMGPATTFEVTGTWTYDGNVANQEQVEPIGGFAKCFSSAQDTQTGASRMILSNGTFVRGSYGYVIVRGDDVRRRWRFDLILDNCRMFATLHGKGKGDPETPTALGYSPTYVMVMDYVRVHTNNFQCHFDKPVDARNYAPTGILGTFYGTDYQQSGECQIYMAGITYARGMGRGGPNWDGTWTNNGIGVFDVYGNGESFHVERVIAEDCHVMVMRAKASINEFRCDSFRLIRCRGGIQVSPSSTGPCRAIVAIRNGEAIDSTLPCVEVNGTSWEDSIPQATVEGIYSLNADNRNSLSRPASVLIYNAKQVTLSNVRVMSPQVGAGIEINDCEQIRVENSTAQNVPTIGLLTRGQNRSISIDGFTARNVAGGAGVNVQSTGGRLRLVNIETSNTKDYSILINTDQRQVELIGSYAEQISGLSRAFYAKSGFDRLEGCKVGANVSTPVLSATGARNVIISCAWLPFIGWGGSSAPAVGTYNKGDILLNAFPATGNPRGFRCITGGTPGVWEQF
Physico‐chemical
properties
protein length:842 AA
molecular weight: 92287,65460 Da
isoelectric point:5,86586
aromaticity:0,09145
hydropathy:-0,26591

Domains

Domains [InterPro]
DC_0474
STR
1–760
DC_0474 DC_1661
IPR005604
ATT
12–127
IPR005604 IPR008635 IPR012334
IPR011049
STR
79–167
IPR011049 IPR011050
IPR011049
STR
112–153
IPR011049
XRA41605.1
1 842
Architecture
STR
ATT
STR
RBD
STR 1-11 | ATT 12-127 | STR 128-763 | RBD 800-842
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRA41605.1
1 842
Domain Start End Length (AA) Confidence
N-terminal 1 266 266 0,9934
Central domain 267 790 525 0,9946
C-terminal 791 842 51 0,9692
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-266
Central
267-790
C-terminal
791-842

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Bosely
[NCBI] 		3411809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA41605.1 [NCBI]
Genbank nucleotide accession
PV329693.1 [NCBI]
CDS location
range 34499 -> 37027
strand +
CDS
ATGAAGACTATCCTGACTTACCTATTCCGAACCGACCGCACCTATGTGGTCTCCTTTGAGTACCTGACACGCCGTTTCGTTAAGGTCTTCCTGCTCGGACAGAACGGCAAACGTGAACTGATCCTTGGGACCGACTTCAAGTTCATCTCCTCAACCGAGATACAGACTACCTTGGCGTGGCCAAATGGCGAGCCGTGGGAGACCCTTGAGATCCGCCGCGTTACCTCTGCGACAGACCGTCTGGTGGACTTCAACGATGGCTCAATTCTTCGGGCAAACGACCTGAATGTGAGCCAGCTGCAAGCGATCCACATTGCCGAAGAGGCCCGAGACTCCGCTGCTGATAACCTATCCGTTGACAGGGACGGCAACTATGACGCCCGTAACCGGCGTATCGTCAATCTGGCTGCTGGGCAGGACGACCGGGACGCTGTGAATATGGAGCAGATCCGGGACATCCGCAACACCATTGGCGAGACATGGAGGGCCTTGAAGCCTTCTCCCGGTCCGCTTCAGCCAGCAACGCGTGATAACGGCGAGCCTCTTCAGCTTGGCGATACGTGGATGGAGTCCACATCCGGTGTCAGCTTTGTGTACGGACCAAGCGGATGGCGCGCTGTCAACGTGGATATGACCCTATTAGGCGGACCCGATGGGGCTGCACTGATCGGCGTTCAGTTCACCAAGAAGTCTGCACCAATCAGGACCTTGGCAGACTACATCGCTGCCTCTGAAGTTAACATCTGGCTGCACGCAGACCGAGTCACAGAGCGTCCCGACCCGCTGAACCCGGACACTTGGGACTGGACTCCAGCGTTCCAGTACGCTGCCGATCTCGGCGGCTCTGTGTTCGCACCTGCCGGTCGTTACATCATCTCCACTGTCCTCATGGGCAAGTCCCTGCGGATCAACTGCGAGCCGGGCGTTGTCTTCTACCAGAAGGACGGAAGCATCCGAAAGGTCAATATGTGGTCCCAAGGTACCAGTATGTTCGAGCAGATGGGTCCGGCCACGACATTCGAGGTAACCGGGACGTGGACCTATGACGGGAACGTCGCCAATCAGGAGCAGGTGGAGCCTATTGGTGGCTTCGCTAAGTGCTTCTCGTCGGCACAAGACACGCAGACAGGCGCATCGCGGATGATCCTGAGTAATGGTACGTTCGTGCGAGGATCGTACGGTTACGTTATCGTGCGTGGTGATGATGTTCGTCGCCGCTGGCGTTTCGACCTGATTCTGGACAACTGCCGCATGTTTGCTACCCTGCATGGCAAGGGCAAGGGCGACCCTGAGACCCCAACGGCTCTTGGGTACTCCCCAACCTACGTCATGGTTATGGACTACGTTCGGGTACATACCAACAACTTCCAGTGCCACTTCGACAAGCCTGTGGATGCTCGCAACTACGCACCTACAGGTATCCTTGGGACATTCTACGGCACGGACTACCAGCAATCCGGCGAGTGCCAGATCTATATGGCAGGCATAACTTACGCCCGTGGGATGGGCCGTGGCGGTCCTAACTGGGACGGTACGTGGACCAACAACGGCATCGGCGTGTTCGATGTGTATGGCAACGGTGAGTCCTTCCACGTTGAGCGTGTAATCGCGGAAGACTGCCACGTTATGGTCATGAGGGCCAAGGCGTCAATCAACGAGTTCCGCTGCGACTCATTCCGTCTGATTCGGTGCCGAGGAGGGATTCAGGTGTCCCCATCGTCCACTGGTCCGTGCCGAGCCATCGTTGCGATCCGTAACGGCGAAGCGATTGACTCGACTCTGCCATGCGTGGAAGTGAACGGGACTTCTTGGGAGGATTCGATACCTCAGGCCACCGTGGAGGGCATTTACAGCCTGAACGCTGACAACCGAAACTCTCTTTCCCGGCCTGCGAGTGTCCTGATCTACAACGCCAAGCAGGTTACCCTGTCGAACGTGCGGGTTATGTCCCCTCAGGTCGGCGCAGGTATCGAGATCAACGACTGCGAGCAAATCCGAGTTGAGAACTCTACTGCCCAGAACGTGCCCACTATAGGCCTGCTGACCCGAGGACAGAATCGGTCCATCTCGATAGACGGCTTCACGGCCCGTAACGTAGCTGGAGGGGCCGGTGTGAACGTGCAGAGCACTGGCGGTCGTCTGCGTCTGGTGAACATCGAGACATCGAACACCAAGGACTACTCGATCCTCATCAACACGGACCAGCGGCAGGTCGAGCTTATCGGCAGCTACGCAGAGCAGATCTCTGGCCTCAGCCGTGCATTCTACGCCAAGAGCGGCTTCGATCGACTGGAAGGATGCAAGGTTGGCGCGAATGTCTCCACCCCTGTCCTGTCAGCAACTGGTGCCCGTAACGTCATCATCTCGTGCGCATGGCTCCCATTCATTGGCTGGGGCGGTTCCTCTGCACCTGCTGTGGGAACGTACAACAAGGGCGATATATTACTCAACGCTTTCCCTGCTACTGGAAACCCACGTGGCTTCCGTTGCATTACCGGTGGCACGCCGGGAGTCTGGGAACAATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cd7f732d785a88e8dd34bf6655adb9eaf29d11e896aa6c81197bffe027a1661
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7750
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50