Protein

View in Explore
Genbank accession
GENB_e6916bc7abe8 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNATLVADGQAWQALRVRRDNLDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPASNSQESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGTSYASYAPKSFRLQYSDDGTTWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQAVSYIGWQELLLLKADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEPSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDTSRSAEWRYSYVSYTHGVYPGPGTQNYPESENLWATLYLRSPEGAWNYHGNRSSYGSSNSEGIGGPTVSSSPPYNVGINNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56444,84250 Da
isoelectric point:6,76005
aromaticity:0,14145
hydropathy:-0,44853

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
69–183
G3DSA:2.60.120.260
IPR008979
STR
80–152
IPR008979
PF22633
RBD
84–163
PF22633
GENB_e6916bc7abe8
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_e6916bc7abe8
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,1622
Central domain 46 244 200 0,7250
C-terminal 245 509 264 0,9735
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-244
C-terminal
245-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaSt-2_45_61k
[NCBI] 		2698996 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871478.1_CDS_[complement(60066..61595)] [NCBI]
Genbank nucleotide accession
MN871478.1 [NCBI]
CDS location
range 60066 -> 61595
strand -
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
2add698e57eb06f9e19aa130915748fce80f9465938626c0c9ed5f66274861b7

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6578
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50