Protein

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Genbank accession
XCO41366.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MMDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERIVDFSDGSVLRATDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGETGTDAVNKNQLDTTLGEAGGILSEVKDLQKDIEDYLQNWGDDTTAIRGVLWVYNQGSAVGGETSFVITKEGPVLAVPYIEINGSRQYRGWHYEYDLGSKTITLAKPLSAGDLVVCTTAETTLPLADSLAGPTGASQIGTSNGLNVQIALDNLRSGVNVLDFMTFAERAAVLNYTGTNDNSEAFRKAFATGSRQIIVPPGRYHVKDVEIPSKVKLFGTYSYKPYNVTSDASFGTDGTIIRKVAGADNMFLWNTACAAEGVMFDGRDRTSPAIQSKSGGKITVGFFKCGFYRFDRVGNRRGAYIGCSFQFCNFNQNNIGIYNTVDGNHIGCTINANKSHGVMLETGANSNTFTNCRNEWNEGDNWNFYGATSIQVINELCDRAFGYGFRISNSSVTLINVNIRRSARTAASGAASAQIYFESSTLKMIGVNSSVGGDDTGGSITEPSPDYFFRMAGTSEGRLEISDSRLTGYTVGLISGTARPSVIRVINSPGWEDTINEGVARISGGRPYIGTMPTATGPANVSPAVLGLSCGGVNTYDNDMFDIHLTIRNTNNGGHNGAILTVLLYREGGAARATIVRVDSRSNAVGEGDVNSTSADPQQTYQVSVEVTSNDASTFNLLVSTKSDNNASYRFRAKVKP
Physico‐chemical
properties
protein length:778 AA
molecular weight: 84182,83760 Da
isoelectric point:5,64175
aromaticity:0,08612
hydropathy:-0,26645

Domains

Domains [InterPro]
DC_0778
STR
1–777
DC_0778
IPR005604
ATT
4–128
IPR005604 IPR012334
IPR011050
STR
314–568
IPR011050
XCO41366.1
1 778
Architecture
ATT
STR
ATT 1-128 | STR 129-777 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41366.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 316 316 0,9947
Central domain 317 652 337 0,9898
C-terminal 653 778 125 0,9903
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-316
Central
317-652
C-terminal
653-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146053
[NCBI] 		3232232 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41366.1 [NCBI]
Genbank nucleotide accession
PP889502.1 [NCBI]
CDS location
range 35501 -> 37837
strand +
CDS
ATGATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTAGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTGTCCCGAAAGTTCGTGCGAGTGTCTCTCGTATCCGATGATAACCGTAGACTCCTCAGCAACATCACTGAGTACCGCTATGTGTCTAAGACCAGAGTGAAGCTCCTTGTTGCGACTACTGGTTTCGACCGTGTGGAAATCCGTCGGTTCACGTCAGCGTCAGAACGCATCGTAGACTTCAGTGATGGCTCAGTGTTACGCGCAACGGACCTTAACGTCTCACAGCTGCAATCTGCACATATCGCCGAAGAAGCACGTGATGCGGCACTTCTGGCAATGCCGGAGGATGATGCTGGTAACCTAGACGCCCGTAACAGAAAGATTGTTCGACTGGCTCCCGGAGAGACTGGTACAGACGCTGTCAACAAGAACCAACTGGACACAACCTTAGGTGAGGCTGGCGGTATTCTCAGTGAAGTTAAGGACCTCCAGAAAGACATTGAGGATTACCTACAGAACTGGGGAGATGATACCACAGCGATTCGCGGCGTTCTCTGGGTGTATAACCAAGGGTCAGCAGTGGGTGGTGAGACATCCTTTGTGATTACTAAAGAGGGTCCGGTCCTTGCGGTCCCGTACATCGAGATTAACGGTAGCCGTCAATACCGTGGGTGGCACTACGAGTACGACTTAGGGTCCAAGACAATCACGCTGGCGAAGCCACTTTCTGCCGGGGATTTGGTCGTATGTACCACCGCTGAGACTACACTGCCACTGGCGGATTCACTCGCAGGACCCACTGGTGCTTCTCAGATTGGTACCTCCAACGGACTGAATGTACAGATTGCACTGGACAACCTACGCTCAGGGGTTAACGTTCTGGACTTTATGACCTTTGCCGAGCGGGCAGCCGTTCTGAACTACACTGGCACCAATGACAACTCCGAGGCATTCAGAAAGGCGTTCGCTACTGGGTCCCGACAGATAATTGTCCCGCCGGGCAGATACCACGTAAAGGACGTTGAAATACCGTCTAAGGTGAAGCTGTTTGGTACGTACTCCTACAAACCGTACAACGTAACCAGTGACGCCTCGTTCGGCACAGACGGTACGATTATCCGTAAGGTGGCTGGAGCAGATAACATGTTCCTTTGGAATACTGCATGTGCCGCTGAGGGTGTGATGTTCGATGGCCGTGACCGCACGTCCCCAGCCATTCAGTCGAAGTCTGGTGGTAAAATAACCGTAGGGTTCTTCAAGTGCGGGTTCTATCGCTTCGACCGAGTAGGTAACCGCCGGGGCGCATACATCGGGTGCTCCTTCCAGTTCTGTAACTTCAACCAGAACAACATTGGGATTTACAATACGGTAGATGGGAACCACATCGGGTGTACCATCAACGCCAACAAGTCCCACGGTGTTATGCTCGAAACAGGCGCGAACTCCAACACGTTCACTAACTGTCGAAACGAGTGGAACGAAGGTGACAACTGGAACTTCTACGGTGCTACTTCGATTCAGGTAATCAACGAACTGTGCGACCGTGCGTTCGGCTATGGGTTCCGTATCAGCAACTCCTCGGTGACACTGATTAACGTCAACATTAGGCGTTCTGCGAGAACAGCCGCATCGGGGGCAGCAAGTGCTCAGATTTACTTCGAGTCGTCTACCCTCAAGATGATTGGCGTGAACAGCTCCGTGGGCGGTGATGACACTGGTGGTTCTATCACAGAGCCTTCGCCGGATTACTTCTTCAGGATGGCTGGTACCAGCGAGGGTCGCCTTGAGATTAGTGACAGTCGCCTCACAGGCTATACTGTTGGGCTAATCTCGGGTACAGCACGTCCTTCAGTTATCCGTGTGATAAACTCTCCGGGTTGGGAGGACACGATTAACGAGGGGGTCGCTCGCATATCAGGAGGCAGGCCGTACATTGGTACAATGCCAACAGCGACTGGTCCGGCAAACGTTAGCCCAGCTGTATTGGGACTGTCCTGTGGTGGAGTAAACACCTACGATAACGACATGTTTGATATTCACCTGACTATCCGCAATACCAATAACGGAGGCCATAATGGTGCAATCCTCACTGTGTTGCTTTACCGTGAGGGCGGAGCCGCTCGTGCGACAATCGTACGAGTAGACAGTCGGTCCAATGCCGTGGGCGAGGGAGATGTGAATAGCACCTCAGCAGACCCTCAGCAGACCTATCAAGTGTCCGTGGAGGTTACGTCAAACGATGCGTCTACTTTCAACCTACTGGTCTCCACCAAGTCGGACAACAACGCATCCTACCGCTTCAGGGCGAAAGTTAAACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
507f911bd09b55c34c8ab0ba0d994339a4a7ba1da60c4ab36e9783e3b92d3783
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank