Protein

View in Explore
Genbank accession
BFM93987.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDDPSVNSELYYRISDLPDASTVDGTEVVEAIQNGKNVKFTLAQLKVLGKNAYDLAVENGFEGDLEAWLTSLHGPAGEKGTKGDTGSQGPMGNGARLLGAVQAVADLPDPSETDEGDCYLVNSHFYAMIAGEWRDLGNLQGPDGQSAYSLAVVAGFQGNEEDWLASLRGSDGIGLKVLGSFHAIGDLPNFDNKSGDAYIIDSTMWVWDTNQWSPVGQVGAPGKSAYQLAKDAGLISSSMTLSQWITSLNGKSAYQVAQANGFSGDQLSWLASISGKSAFDVAVANGFQGTQAQWLTSLTGLKGDQGPKGEKGDQGDLGPGIKILGKLDDSSALPETADAIGDGYLIDDHFWGWTGEAFEDLGVIRGPKGDTGADGTAGVKGDKGDTGAKGDSAYQLAVAAGFAGTQTQWLATLNGKNGESAYQLAVDAGYVGDMASWLASLKGDKGDIGPSGPAGPEGAMGRGLAILGTVPDTASLPTDAAIDDAYVIGTDLYINTPTGWTNAGPVRGPQGEQGEQGEQGIQGVKGDKGDKGDQGEQGVKGDQGDIGPEGPIGPGFVVLGSFTDPSQLPSSAANKGDSYLINGHLWSWNGTFFVDAGDVRGPKGDQGEKGDKGIQGLQGAQGVQGIQGLQGAQGIKGDKGDKGDKGDLGPQGNAGDKGAKGDTGDTGPMGPGVKILGTVMTSGDLPSSATNLGDMYIAQDTLHGWAWTGAGFTDVGPIQGAKGDRGAQGIQGIQGIQGVQGIQGVKGDTGNRWIVLSRDPNAVDGLPGDYYLNSDTLRFFQKTSNVTWSWVGYLGGGNVYDANPDGIPKARLDGEWVPIDVLEAPKDNGTYVRKNGEWLLVEIPTATRQKMAAFDGKISPLTTAVPWYPPADASMLTGIRIQLGTPSPVDLILNIFISHGDGFSETVSLPISSGSSNDYIQLSNSLQPGYAISLQIVGTGGSDLVLTFDYK
Physico‐chemical
properties
protein length:952 AA
molecular weight: 98451,33490 Da
isoelectric point:4,34224
aromaticity:0,07668
hydropathy:-0,34233

Domains

Domains [InterPro]
DC_0915
ATT
15–193
DC_0915 DC_1340 IPR008160 IPR008160 G3DSA:1.20.5.320 G3DSA:6.20.230.10 DC_2237
IPR050149
Unmapped
74–769
IPR050149
DC_1967
ATT
173–252
DC_1967 DC_1340 DC_0730
DC_1340
STR
524–644
DC_1340
BFM93987.1
1 952
Architecture
ATT
STR
ATT
RBD
ATT 15-252 | STR 253-820 | ATT 821-843 | RBD 844-952
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage FLC4-3B
[NCBI] 		3157663 Viruses > unclassified bacterial viruses >
Host Ralstonia pseudosolanacearum
[NCBI] 		1310165 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFM93987.1 [NCBI]
Genbank nucleotide accession
LC819007.1 [NCBI]
CDS location
range 155602 -> 158460
strand -
CDS
ATGAGCGATGATCCATCTGTCAATTCAGAGTTGTATTACCGGATCTCCGATCTACCCGATGCCTCAACCGTCGATGGCACAGAAGTCGTCGAAGCAATTCAAAACGGGAAGAACGTCAAGTTCACTTTAGCTCAGCTGAAGGTCCTGGGGAAGAACGCCTACGACTTGGCGGTAGAGAACGGGTTCGAGGGAGATCTCGAAGCGTGGCTGACCAGTCTGCATGGTCCGGCTGGTGAGAAGGGCACCAAGGGCGACACTGGCTCGCAGGGACCCATGGGTAACGGTGCTCGACTCTTGGGTGCGGTGCAAGCTGTGGCTGACCTGCCTGATCCGAGCGAGACTGATGAAGGTGACTGTTATCTGGTCAACTCCCACTTCTACGCGATGATTGCGGGAGAGTGGCGAGACCTGGGTAACCTGCAGGGACCGGATGGCCAGAGTGCCTACTCGCTGGCGGTGGTAGCAGGCTTTCAGGGTAACGAAGAAGACTGGCTGGCGTCTCTGCGCGGCTCAGACGGCATTGGTCTTAAAGTGCTGGGTTCGTTCCACGCCATCGGAGATCTGCCCAACTTCGATAACAAGTCGGGTGATGCGTATATCATCGACTCGACCATGTGGGTCTGGGACACCAACCAGTGGTCTCCAGTGGGTCAGGTCGGTGCACCGGGTAAGTCGGCTTACCAGTTGGCCAAAGACGCTGGATTGATTTCCTCGTCGATGACCCTGTCCCAGTGGATTACTTCACTGAACGGGAAGTCAGCGTATCAGGTTGCGCAGGCCAACGGCTTCTCGGGGGACCAGCTCTCGTGGCTGGCCTCGATCTCGGGTAAGAGCGCCTTTGATGTCGCAGTGGCCAATGGTTTCCAAGGCACTCAAGCTCAGTGGCTGACTTCACTCACTGGACTCAAGGGTGACCAAGGACCTAAGGGTGAGAAAGGCGATCAGGGTGATCTGGGGCCAGGGATCAAGATCCTGGGTAAGTTGGATGATTCCAGCGCGTTGCCTGAGACAGCAGATGCGATCGGTGACGGTTACTTGATCGACGATCACTTCTGGGGCTGGACTGGTGAAGCCTTTGAAGACCTCGGGGTCATTCGCGGTCCTAAGGGTGACACTGGTGCTGATGGCACAGCAGGGGTCAAAGGTGATAAGGGTGATACGGGAGCGAAGGGTGACTCCGCCTATCAACTCGCTGTTGCCGCAGGCTTTGCTGGTACACAGACTCAGTGGTTGGCAACACTGAATGGTAAGAACGGAGAATCCGCTTACCAGTTGGCTGTAGACGCAGGCTACGTCGGCGATATGGCCTCGTGGCTGGCTTCACTCAAAGGCGACAAGGGTGACATTGGTCCGTCAGGCCCAGCCGGTCCTGAGGGTGCTATGGGTCGCGGTCTTGCGATTCTCGGCACAGTCCCGGACACCGCTTCCCTGCCGACTGACGCAGCAATCGACGATGCCTACGTCATCGGTACGGATCTCTACATCAACACCCCTACAGGCTGGACCAATGCTGGTCCGGTGCGTGGTCCTCAAGGAGAACAGGGTGAACAAGGTGAGCAAGGGATTCAGGGTGTTAAAGGAGACAAAGGCGACAAAGGAGATCAGGGCGAACAAGGGGTAAAAGGTGACCAAGGTGATATCGGTCCCGAAGGCCCCATTGGTCCTGGCTTTGTTGTCCTGGGTTCCTTCACTGATCCGAGTCAGTTGCCCAGTAGCGCTGCCAACAAAGGTGACAGCTATCTGATCAACGGCCACCTCTGGAGCTGGAACGGCACGTTCTTTGTTGACGCCGGTGACGTCCGTGGTCCGAAAGGTGACCAGGGCGAGAAAGGGGACAAAGGGATTCAGGGTCTGCAGGGCGCGCAGGGTGTGCAAGGCATTCAAGGCTTGCAAGGCGCCCAAGGTATCAAAGGGGATAAGGGAGATAAAGGAGACAAGGGGGATCTCGGCCCTCAAGGCAACGCTGGGGACAAAGGTGCGAAAGGGGATACTGGCGACACGGGTCCGATGGGGCCGGGAGTCAAGATTCTTGGCACGGTGATGACCAGTGGTGACTTGCCGAGTAGCGCTACGAATCTGGGCGATATGTACATTGCTCAGGACACCTTGCATGGTTGGGCTTGGACCGGTGCGGGTTTCACTGATGTGGGTCCAATCCAAGGTGCAAAGGGTGATCGTGGCGCGCAAGGTATCCAGGGGATTCAAGGCATCCAGGGGGTGCAGGGAATTCAAGGGGTCAAAGGCGATACCGGTAACCGCTGGATCGTGCTGAGTCGTGACCCCAACGCAGTCGACGGATTGCCTGGCGACTACTACCTGAACTCTGACACGTTGCGGTTCTTTCAAAAGACCAGTAACGTGACGTGGAGTTGGGTGGGGTATCTGGGCGGAGGTAACGTCTACGATGCCAACCCGGACGGCATTCCCAAGGCTCGACTCGATGGTGAGTGGGTGCCGATTGACGTCTTGGAAGCCCCGAAGGATAACGGCACCTACGTTCGCAAGAATGGAGAATGGTTGCTGGTAGAAATCCCGACAGCGACTCGCCAGAAAATGGCTGCCTTCGATGGCAAGATCTCGCCGTTGACGACTGCAGTGCCTTGGTATCCGCCTGCCGATGCTTCGATGCTCACCGGTATCCGGATTCAGCTGGGTACGCCGAGTCCGGTGGACCTGATTCTGAATATTTTCATCAGTCACGGCGATGGCTTCAGTGAAACCGTCTCGCTGCCGATTTCATCCGGTAGTTCAAACGACTACATCCAGTTGTCGAATTCGTTGCAACCAGGCTACGCAATTTCCCTGCAGATTGTAGGAACAGGTGGTAGCGATCTGGTGCTGACGTTCGACTACAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4a4d9243107fbe69b4e30cefef8f1a6b457b0b133afd1a8998f0cbdec2562e5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6964
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genomic sequences of novel Ralstonia jumbophages isolated from leaf litter compost Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2024-08-09 — GenBank