Protein

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Genbank accession
YP_008433587.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKIVQMPEDLNRRSEYFGLYRGELYSGDVAVSGNPVPKASRYYPSKSKQFDAIKMVSSGSGYPQGMFIDVPGSLMAVQGTANFVAVANPSQLRGAQNQPFESKLGATAGKTLFQHGHNIIVNQDYEQEFSISGTALNTANANSEGVSAFFTNGRIVGETNTHLFVHQFRFEDGGNDESAFYALHKVTGVLIRVLRGRFDLEYLGEDSNSNPLFWVNAQQLTDAPASFSFVGTGTGAGCAQYLMRGVPTPTGVGNFVQVYVERMGNGVASGASGRTNCVTLCSTDAPIVEYDGNGKVAAFTLLNTDDTRLTCGSSTFPGLRGGYYVNWCRYTLSAGVLTRQILQRIDITEYEGAVFNNQDPSYGKSSSLIQCVYFVEDNQLCAVFGNGGALTYLPSDNRFQAAILPTLLLRASVGEQNQLGELEWQRLDLAVTPNYVFNFGMLDKKAKKLWQVSSMSFRRDFLEVRCLSLSDVLCADYGYVSGKSFAMGAVDGRLLAAVQVEGNMVRKYQFVSEAVGANVTLAFNQAEYQVGDTATLTVNSDVELLVTVELDGGTFSDTTDSKEFQVFGELQLPVTVKAALSASVSNIRLPEEVPE
Physico‐chemical
properties
protein length:595 AA
molecular weight: 64621,79220 Da
isoelectric point:4,98088
aromaticity:0,10420
hydropathy:-0,11210

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_008433587.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 69 69 0,1785
Central domain 70 268 200 0,3274
C-terminal 269 595 326 0,6522
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-69
Central
70-268
C-terminal
269-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008433587.1 [NCBI]
Genbank nucleotide accession
NC_022096 [NCBI]
CDS location
range 219118 -> 220905
strand +
CDS
ATGAAGATAGTCCAGATGCCCGAGGACTTGAATCGCAGGAGCGAATACTTCGGGCTATATCGTGGAGAGCTGTATTCTGGCGACGTGGCCGTATCAGGTAATCCGGTTCCGAAAGCGTCTCGATATTACCCGTCGAAGTCAAAACAGTTTGATGCCATCAAGATGGTGTCTTCCGGCTCCGGGTACCCGCAAGGAATGTTTATCGACGTTCCGGGTTCTTTGATGGCGGTACAGGGGACGGCCAACTTTGTTGCTGTCGCAAACCCATCGCAGCTACGCGGCGCACAAAATCAACCGTTTGAGTCCAAGCTCGGCGCCACGGCTGGAAAGACTCTGTTCCAGCACGGCCACAACATCATCGTCAATCAGGACTACGAACAGGAATTCAGTATTTCAGGCACTGCACTGAACACGGCAAACGCCAACTCCGAGGGAGTGTCCGCCTTCTTCACCAACGGTCGTATCGTAGGTGAGACGAATACGCACCTGTTCGTGCACCAATTCCGCTTCGAGGATGGCGGCAACGATGAGTCCGCATTCTACGCACTGCACAAGGTGACTGGTGTTTTGATCCGGGTGCTGCGCGGGCGCTTTGACCTAGAGTATCTCGGAGAGGATTCCAACTCCAATCCGCTGTTCTGGGTCAACGCACAGCAGCTAACTGATGCTCCTGCGAGCTTCTCTTTCGTAGGCACAGGAACGGGCGCCGGGTGCGCACAATACCTGATGCGCGGAGTTCCTACTCCAACAGGGGTGGGGAACTTCGTGCAGGTGTACGTCGAGCGCATGGGCAATGGCGTCGCAAGCGGTGCTTCTGGACGGACCAACTGCGTTACCTTGTGCTCGACTGACGCACCGATCGTCGAGTATGACGGCAACGGTAAAGTCGCGGCGTTCACCTTGCTCAATACAGACGACACTCGCCTTACGTGCGGCTCCAGCACCTTCCCGGGTTTGCGTGGCGGGTACTACGTCAACTGGTGTCGATATACGCTCAGTGCGGGCGTGCTGACTCGACAGATTCTCCAACGTATCGACATCACCGAATACGAAGGAGCCGTGTTCAACAACCAAGACCCGTCGTACGGCAAGTCCTCCTCGCTGATTCAGTGCGTCTACTTCGTTGAGGACAATCAGCTATGCGCAGTCTTTGGTAACGGAGGTGCCCTGACATATCTTCCTTCGGACAACAGATTTCAGGCCGCCATTCTACCTACGCTGTTACTGCGTGCGTCCGTAGGAGAGCAGAACCAGCTCGGTGAGTTAGAGTGGCAGCGACTCGATCTAGCGGTGACGCCCAACTACGTCTTCAACTTCGGAATGCTGGACAAGAAAGCCAAGAAGCTGTGGCAGGTTAGTTCTATGTCCTTCCGCAGGGACTTTCTTGAAGTGCGTTGCCTGAGTTTGTCGGATGTCCTGTGCGCCGACTACGGATATGTCTCGGGCAAGTCTTTCGCCATGGGTGCTGTGGATGGACGCCTCCTAGCAGCCGTGCAAGTCGAAGGCAACATGGTCAGGAAGTATCAGTTCGTCTCCGAAGCGGTTGGAGCTAACGTCACTCTGGCTTTCAACCAAGCTGAGTACCAAGTCGGAGATACTGCGACGCTTACCGTGAACTCAGACGTTGAGTTGCTGGTCACAGTGGAGCTCGACGGCGGTACGTTCTCGGATACCACAGACTCCAAAGAGTTTCAGGTGTTCGGCGAACTTCAACTGCCCGTGACGGTCAAAGCTGCGCTCTCCGCCTCCGTGTCCAACATTCGTTTGCCTGAAGAGGTGCCAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf29e2271e104499a24db52c6f4e39097d8092e229bb5063b44dc812b58f227f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5622
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50