Protein

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Genbank accession
QDF14682.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSNILDSAKQHLSNTENLKLAHLVSLELPGEEGVFVYFTDYFRSITFKGHKYETGVVKRIGDVKQTKDFSIYRVPVQVSGAIEEEINRVLNSKSFLNRKIKILRAFLDEDGQVIPIYSNGDTITYFEGIIVTSKLDETNTSSGTGRSTITWNCANKNYELDAVNGRITDDESHRGLINVGGTMQPSGSAKKPEYQLDRGFFHAGKSVKLLAEYQTKEKRFRLKKRRAGGFRGLMGQKHYDMEEYWADVVREVDMDINLTAKYLPVLYGVQKVSGIPIFFDTDIGNPEEVWAVYAFCEGEIDGFLDIFFGDNPMICVSENDQEKRACVGMKRNNGDTIGALAPKSGRTAPSNHGEHYIYNDGDGPIEFWTFHGSSTQDAAKILVDKASAGEFKLQSDGSYGSEYWDDTFKLLDTAYVVVKYTLNENRTSIPEVSAEIQGKKIPVYHEDGTSTSDKTSLNLAWQALDYLRSTTYGAGLTLDEIDLPAIQECAKIMDDIDNSYEPDWVPYWRYLGWEDYKAENRQILQGSGLLSTSDTVFKNIQALIGQFDASLNIVSGKYTLTMEANRPPIYDIDEGDIINGSIQVSDNSMDQKYNAVQASIMDPSKGWGTNTITFFNKDYKLEDNGKDRKANISFPFITNYYTARTRAEYYLRRSRYNRTVSFELPFTFMWLYPNANITLTKKRYNWDKKTFMIQDMTWMANGHIKVVAREYDETMFLSSGQVDNSNNQIPDVVVNVLPPRDLKYEPKVGDNKVGLNGTLSWFPSLSKRVAYYTIKYTGLTDLITIPAPGNIAPAQRIELPLYNLAEGEYTFEVRAVSFDGETSMPISITEKINPSAILPMIENFVIVNRAVVSGNVFVGKDLQLAWDELIEGRSVDDFKYHLRFISGDTGDTLRDVTTTSTTFTYTLAMNKEDFKLLHGTLGIHRNMTVYIRGEGSNNITSINWTVL
Physico‐chemical
properties
protein length:947 AA
molecular weight: 107030,13800 Da
isoelectric point:5,23944
aromaticity:0,11193
hydropathy:-0,41404

Domains

Domains [InterPro]
DC_0187
STR
242–941
DC_0187
IPR032876
ATT
539–693
IPR032876 IPR003961
QDF14682.1
1 947
Architecture
STR
ATT
STR
STR 242-538 | ATT 539-693 | STR 694-941 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDF14682.1
1 947
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,9216
Central domain 307 522 217 0,4655
C-terminal 523 947 424 0,0481
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-522
C-terminal
523-947

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage Pontus
[NCBI] 		2590874 Uroviricota > Caudoviricetes > Demerecviridae > Thalassavirus > Thalassavirus pontus
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDF14682.1 [NCBI]
Genbank nucleotide accession
MK907780.1 [NCBI]
CDS location
range 26249 -> 29092
strand +
CDS
ATGAGTAACATACTAGATTCAGCAAAACAACATCTAAGTAATACAGAAAACCTTAAATTGGCTCATCTAGTTTCTTTGGAGTTACCTGGTGAGGAAGGTGTTTTTGTATACTTTACTGACTACTTTAGAAGCATCACTTTCAAAGGTCATAAATACGAAACTGGTGTAGTTAAGCGCATAGGTGACGTAAAGCAAACAAAAGACTTCAGCATTTATAGAGTACCTGTACAAGTTAGTGGGGCTATAGAAGAAGAGATAAATAGAGTTCTTAATTCTAAAAGTTTCTTAAATAGAAAAATAAAGATTCTTAGAGCATTCCTAGATGAGGATGGTCAAGTGATCCCTATTTACTCTAATGGGGATACAATTACATACTTTGAAGGTATTATAGTAACCAGCAAGTTAGATGAGACTAATACTAGCTCTGGTACTGGGCGATCTACTATTACATGGAACTGTGCGAACAAGAACTATGAACTAGACGCTGTAAATGGTCGTATAACGGATGATGAGTCTCATCGTGGTCTTATCAATGTAGGCGGTACTATGCAGCCTTCTGGTTCTGCTAAAAAACCAGAATATCAGCTTGATAGAGGTTTCTTCCATGCAGGTAAGTCTGTAAAACTACTTGCTGAATACCAGACAAAGGAAAAACGTTTTAGATTGAAAAAACGTAGAGCAGGCGGATTCAGGGGGTTGATGGGTCAGAAGCACTACGATATGGAAGAATACTGGGCAGACGTTGTAAGGGAGGTAGATATGGATATAAACCTTACAGCAAAATACTTGCCAGTACTTTATGGTGTTCAGAAAGTATCAGGTATTCCTATCTTCTTTGACACAGATATTGGTAATCCTGAGGAAGTGTGGGCAGTATATGCTTTCTGTGAAGGAGAAATTGATGGCTTTCTTGATATATTCTTTGGTGACAATCCTATGATCTGTGTATCAGAGAATGATCAAGAGAAACGTGCCTGTGTAGGTATGAAAAGAAATAATGGTGATACTATAGGAGCACTAGCACCTAAAAGTGGAAGAACAGCCCCAAGTAACCACGGAGAACATTATATCTACAATGATGGAGACGGCCCTATAGAGTTCTGGACGTTCCACGGATCAAGTACACAAGATGCCGCCAAGATTCTTGTCGATAAAGCGTCTGCTGGTGAATTTAAGCTACAGAGTGATGGTAGCTACGGTTCAGAATATTGGGACGATACATTCAAGTTACTAGACACAGCATACGTTGTTGTTAAGTATACTCTCAATGAAAACAGAACAAGTATTCCAGAAGTTTCCGCAGAAATACAGGGTAAGAAAATCCCAGTATACCACGAAGACGGAACATCCACTAGCGATAAGACCTCACTCAACCTAGCTTGGCAAGCACTAGACTATCTAAGAAGTACAACTTATGGGGCGGGCCTTACTCTAGATGAGATAGATTTACCAGCCATTCAAGAATGTGCTAAGATAATGGATGACATTGATAACTCTTACGAGCCTGATTGGGTTCCTTACTGGAGATACCTTGGATGGGAGGACTATAAGGCTGAGAATAGACAGATACTACAAGGTTCAGGATTACTATCTACTAGTGATACGGTATTTAAAAATATTCAGGCTTTAATAGGACAGTTCGATGCTTCATTGAATATAGTTAGTGGTAAATATACCCTTACTATGGAAGCTAATCGCCCCCCTATCTATGACATAGATGAGGGTGATATTATAAATGGAAGCATTCAAGTATCAGATAATTCCATGGATCAAAAATATAATGCTGTTCAGGCTAGTATCATGGATCCATCTAAAGGTTGGGGTACTAATACCATTACGTTCTTCAATAAGGACTATAAACTAGAAGATAACGGTAAAGATAGGAAAGCTAATATATCTTTCCCATTTATTACTAACTACTATACAGCTAGAACACGCGCAGAGTACTACTTACGAAGATCTAGATATAATAGAACTGTGTCTTTCGAGCTACCTTTTACATTTATGTGGTTGTACCCAAATGCCAATATAACTCTTACTAAGAAGCGTTATAATTGGGATAAGAAGACATTCATGATACAGGATATGACATGGATGGCCAATGGCCACATCAAAGTAGTAGCAAGAGAATACGATGAAACAATGTTCTTAAGCTCTGGACAAGTAGATAATAGTAATAATCAGATACCTGATGTAGTTGTGAATGTACTACCACCTAGAGATCTTAAGTATGAACCTAAGGTAGGGGATAATAAAGTTGGCCTTAATGGTACATTATCTTGGTTTCCTAGCTTGTCTAAACGAGTAGCGTACTACACTATTAAGTATACTGGACTTACGGATCTTATCACTATCCCTGCTCCAGGTAACATAGCTCCAGCGCAGAGAATAGAGTTACCACTATATAATTTAGCAGAAGGTGAGTATACTTTTGAAGTCCGTGCTGTGTCATTCGATGGCGAAACAAGTATGCCTATAAGTATTACAGAGAAGATAAACCCTAGTGCGATACTGCCTATGATTGAAAATTTCGTTATAGTAAATCGAGCAGTAGTATCTGGTAACGTATTCGTAGGTAAAGACTTACAGTTAGCATGGGATGAGTTAATTGAGGGTAGGTCAGTGGACGACTTCAAGTACCACTTGAGATTTATCTCTGGTGATACCGGAGACACACTAAGAGATGTTACTACAACAAGCACCACTTTCACATACACCCTAGCGATGAATAAGGAAGACTTCAAACTCTTACATGGTACTCTAGGTATACACAGAAATATGACGGTGTATATTAGAGGTGAGGGTTCTAACAATATAACTTCAATTAATTGGACGGTATTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f5e4d898cac90d441c2e2d2157186f468f06595f847d4df1f88de4c2524f138
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50