Protein

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Genbank accession
UYE95884.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAITAAEAFRDYETDGVPSSGSHKIKKSDMRSWGAWIEAFINAIGANSGLVFTLRASLDLVLNHPAATMAWVIGDPVAANNGIYQKLGASGTGSWLRVSDLPFSFIIASDAGAGTANAIQATTPIPVSESALIILNVFEANTASPVTVSFNGGSALTIKTNTGSDVAAGGLVSGMRLLGVISGSTFRLVSDQVSSAIVAAAEDAADRAEAAASAINYVTSYGSVDLTGAVSAQAVIEAAVAWSYANNTPLFWPDGVYLSTASIPNFHDVRHQGPGVVKRGTDLWYITPPSYSEINHVYAAASGGLSTNDGLSASQPFDTFQNAIEAIEKWAPLERGQWQIDLAAGVYARGRFPDEGLMTAFPIRIVGPSVGGHPNVPTAIIREGATEAAFGILAFYTDIYVQDVKIEDYNGSSSSSGIRVNWGRVLTNNVHFEDCYYGVTGMNFATIDVKGGIFNDCGYLNSDSGQASGHAIRGVFHTKWEIGTQSAGTLANGPIIRNSAGAARAQEYADGHWDYVTIEDCSSGLRLLVNSRLNIDGSSFKRISNSAVYATQGSYVDPTSSTVFGTGADANGRNYSMGSGSNASGGGIIGQNVANSANPGILKTSFPNQVINSTANAAIDTFTVDQDALNDAQFSGISAKKLIARVSGDLTGTTGTFKRLLLRVGGTLAGGTPTTISFSQTATGPFEATFEVAFTGPNAQYVSMGGRHSSSSPVNNANTTIATNADVVVSLEGVMNNAADSITIKSVEWSQIGF
Physico‐chemical
properties
protein length:754 AA
molecular weight: 78492,15660 Da
isoelectric point:4,96036
aromaticity:0,08753
hydropathy:0,02056

Domains

Domains [InterPro]
DC_1788
STR
23–642
DC_1788
IPR011050
STR
296–626
IPR011050
DC_2148
RBD
600–753
DC_2148
UYE95884.1
1 754
Architecture
STR
RBD
STR 23-642 | RBD 643-753 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE95884.1
1 754
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,9675
Central domain 233 601 370 0,9092
C-terminal 602 754 152 0,9881
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-601
C-terminal
602-754

Taxonomy

  Name Taxonomy ID Lineage
Phage Sinorhizobium phage NV1.1.1
[NCBI] 		2985444 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Sinorhizobium meliloti
[NCBI] 		382 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE95884.1 [NCBI]
Genbank nucleotide accession
OP484858.1 [NCBI]
CDS location
range 47452 -> 49716
strand +
CDS
ATGGCCATCACCGCAGCAGAGGCCTTCCGCGACTACGAAACTGATGGTGTGCCGTCGTCTGGGTCGCATAAGATTAAAAAGAGCGACATGCGCTCGTGGGGCGCATGGATTGAAGCGTTCATCAATGCCATCGGCGCCAATAGCGGCCTAGTTTTCACCCTACGGGCAAGCTTAGATCTGGTCCTGAATCACCCTGCCGCTACGATGGCTTGGGTCATCGGCGATCCGGTCGCAGCGAATAACGGCATCTACCAGAAGCTGGGCGCCTCAGGCACTGGTTCGTGGTTGCGCGTCTCGGATCTGCCGTTCTCGTTCATCATCGCGTCTGACGCCGGTGCTGGCACAGCGAATGCTATTCAGGCGACGACTCCTATTCCAGTTTCGGAGTCGGCGCTCATTATCTTGAACGTGTTTGAGGCTAACACCGCGTCGCCGGTAACGGTCTCTTTCAACGGTGGTTCTGCGCTGACGATCAAGACTAACACCGGGAGCGATGTTGCTGCCGGCGGCCTTGTTTCGGGCATGAGATTGCTAGGAGTAATCTCCGGCTCGACCTTCCGCCTTGTCAGCGACCAGGTCTCTTCCGCAATCGTGGCGGCGGCAGAGGATGCAGCAGACCGTGCGGAAGCTGCGGCGTCTGCAATCAACTACGTCACCAGCTACGGGTCTGTAGACCTTACGGGCGCAGTTAGCGCGCAAGCTGTCATTGAGGCGGCCGTAGCGTGGTCTTACGCCAATAACACCCCGCTGTTTTGGCCCGATGGTGTGTATCTGAGCACCGCATCCATCCCGAACTTCCATGATGTTCGGCATCAAGGACCGGGTGTGGTGAAGCGTGGCACTGATTTGTGGTACATCACCCCGCCATCCTACAGTGAGATAAACCACGTCTACGCTGCGGCGTCGGGTGGGCTATCGACCAATGACGGCCTCTCCGCATCCCAGCCTTTCGATACGTTCCAAAACGCCATCGAGGCCATCGAGAAGTGGGCTCCGCTCGAAAGGGGACAGTGGCAGATTGACCTTGCCGCCGGTGTCTACGCACGCGGGCGTTTTCCCGATGAAGGGCTGATGACGGCCTTTCCTATCCGTATCGTCGGGCCATCAGTCGGAGGCCACCCGAACGTTCCGACGGCTATCATCCGTGAGGGCGCAACGGAAGCAGCATTCGGCATTCTCGCATTTTACACGGATATCTACGTACAAGATGTGAAGATTGAGGACTACAACGGTAGCTCCTCCAGCTCAGGTATCCGCGTGAACTGGGGCCGTGTCCTGACCAACAATGTTCATTTCGAAGACTGCTATTATGGCGTTACCGGAATGAACTTCGCCACGATCGACGTCAAGGGTGGGATTTTCAACGACTGCGGTTATCTCAACAGTGACTCGGGGCAGGCGTCAGGTCACGCCATTCGGGGCGTCTTCCATACAAAGTGGGAGATAGGGACGCAGAGCGCGGGGACGTTGGCTAATGGCCCAATTATCCGCAACTCCGCCGGGGCCGCTCGTGCCCAAGAATACGCGGACGGCCATTGGGACTATGTGACCATCGAGGATTGCTCCTCGGGTCTGCGGCTACTTGTCAACTCTCGCCTGAACATCGACGGATCGAGTTTCAAGAGAATTTCGAACTCAGCGGTTTACGCAACGCAGGGTTCCTATGTCGACCCCACATCCAGTACCGTCTTTGGTACTGGCGCGGATGCCAACGGCCGCAATTATTCGATGGGTAGCGGGTCCAATGCCTCTGGCGGTGGGATTATTGGGCAGAACGTTGCCAACAGCGCAAACCCCGGAATCCTTAAAACGTCGTTCCCTAACCAGGTCATCAACTCAACGGCCAACGCAGCGATAGACACGTTCACAGTAGATCAGGATGCGCTCAACGACGCACAGTTTTCCGGGATATCGGCAAAGAAACTGATAGCGAGGGTCTCGGGGGATCTCACAGGGACGACTGGAACCTTCAAGCGTCTTCTGCTGCGCGTGGGCGGAACTCTGGCCGGTGGAACCCCCACGACTATCAGCTTCTCGCAGACGGCGACCGGGCCGTTTGAAGCTACATTTGAGGTGGCATTCACTGGCCCGAATGCTCAGTACGTCTCGATGGGTGGGAGGCATTCAAGCTCCAGCCCGGTCAACAACGCAAACACAACGATTGCAACCAACGCCGATGTAGTTGTTTCCCTCGAAGGTGTGATGAACAATGCCGCAGACAGCATCACAATCAAGTCTGTGGAGTGGTCGCAGATTGGCTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
89ac9dd387f9a7b87465abffe31f3604dda79cfa17d9ab6669f8eabcdc1b2c6e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8140
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genome sequence of an Ensifer meliloti phague Afonin,A., Muntyan,V., Kozlova,A., Saksaganskaia,A., Vladimirova,M. and Roumiantseva,M. 2019-01-10 — GenBank