Protein
View in Explore- Genbank accession
- AXQ52520.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MSISRLGGISRIHRNGVDLIQVRRGSQLIWSSNILLDTFNRDDANTLGEHWTSTGTGYKLGISSGGARLAVPDGLVALALNTDYARFNAATLGSDDYDLEIVVGSKGASDSITGTKHRTEVFARGSNTGVTHGVGIDLYGSAVSIVRRVASVNTIMKAGGAYAPGDRVRLRGVGNLHNLYVNGEFRVQWDDSSGTAQKGSGYRSLILRADGSKDLLGPRRFSASIDSVQLA
- Physico‐chemical
properties -
protein length: 231 AA molecular weight: 24525,11380 Da isoelectric point: 9,63482 aromaticity: 0,06494 hydropathy: -0,18831
Domains
Domains [InterPro]
DC_1994
ATT
11–231
ATT
11–231
IPR055681
STR
35–203
STR
35–203
1
231
Architecture
ATT 11-231
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
231
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 219 | 219 | 0,0389 |
| Central domain | 220 | 220 | 2 | 0,5708 |
| C-terminal | 221 | 231 | 10 | 0,6686 |
Note: Constraints were applied during segmentation.
Fixed 210 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 210 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-219
1-219
Central
220-220
220-220
C-terminal
221-231
221-231
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Mycobacterium phage FrenchFry [NCBI] |
2301543 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AXQ52520.1
[NCBI]
Genbank nucleotide accession
MH697584
[NCBI]
CDS location
range 38662 -> 39357
strand +
strand +
CDS
GTGTCGATCAGCCGTCTGGGCGGTATCTCCCGCATTCACCGCAACGGCGTCGACCTGATCCAGGTCCGGCGCGGCTCCCAGCTGATCTGGTCGAGCAACATCCTCCTGGACACGTTCAACCGGGACGACGCCAACACGCTCGGCGAGCATTGGACCAGCACCGGAACCGGGTACAAGCTGGGCATTTCCAGCGGCGGTGCCCGCCTGGCGGTGCCCGACGGCCTGGTGGCCCTGGCGCTCAACACCGATTACGCACGGTTCAACGCCGCCACGCTGGGCAGCGACGACTACGACCTGGAGATCGTGGTTGGGTCGAAAGGTGCCAGCGACTCCATCACCGGCACCAAGCACCGCACCGAGGTGTTCGCGCGTGGGTCCAACACCGGCGTCACGCACGGCGTCGGTATCGACCTCTACGGCTCGGCGGTGTCCATTGTGCGCCGGGTGGCCAGCGTCAACACGATCATGAAGGCCGGTGGTGCCTACGCCCCCGGTGACCGGGTACGCCTGCGCGGTGTCGGCAACCTGCACAACCTCTACGTCAACGGCGAGTTCCGGGTGCAATGGGATGACTCCAGCGGCACCGCCCAGAAGGGGTCGGGGTACCGCTCGCTGATCTTGCGCGCCGACGGGTCCAAGGACTTGCTTGGACCACGCCGGTTCAGCGCCTCTATCGACTCGGTGCAGCTCGCCTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
69c3db5a76187d658ca579b99860390c529ecdc5ed17ce6cc1aac8269c6a8ed2
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50