Protein

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Genbank accession
QIN96899.1 [GenBank]
Protein name
tail sheath monomer
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MVIKTASPGIVVLEHDLTRGTSDAITTNIAAFVGPFQRGPVDEHVLISTEAEFQRVFGDPTDDNYEYWWTVANYLEYGGVCYVVRADDSVGDSSGTFLQTMKNATDEIVTDPSDEPVYVKNEDDFIENWFQTASAPGKFIARDPGTWANGLAVAVIDHGADYQMSLKTTGQQVIASGDDAAATVRFDDTTVLGSVVGDYIKVAAPAGTATLVVGDRVEAWLSGASEGVAFVISIDSDNYQLLKISGDFAVGSTLTPANSADTPGTTETGAITAAFPQGQYKLYSLDEEETSVINTIFVPNTVTKAVGETYGWPATPIANQKVTTGGPAALGDTYVYNLNLDEWVLKYEPATDDLFADGTNVFQLNAAGDWYTQQEAFAGLPWYRFAGRPGTSQNAAERGCVNDELNIIVYDASGNFTGTKGNTLETYFGVSKLRGAVTQEGDRNYYIDSINARSGHIFANQTLAAPENGINSGLSAVGTQIASDVKCEFVDVKSYVLSHGVDNYNISLGELQDGYNKFIRENVPELDYILQGPAMGNLDDSVAKANFIISLCEERKDCMAFLSPPRYAVVGAFDSMTATNSIIEWAHELSSSSYAVFDSGYKYTYDRYNDQYRYIPLNGDIAGLMVNASLTAEAWYSPAGLSRGQIRNVVKLPYNPSKTQRDQLYTNRVNPVVSFPGEGHILFGDKTALGYSSAFDRINVRKLFLVIEKEIAKISRTTLFEFNDDVTRSLFKNNVNPYLRDIQAKRGMYDFLVVCDNTNNTPEVIDRNEFVADLYIKPTKSINFITLNFIATKTGVSFDESVALFRGN
Physico‐chemical
properties
protein length:808 AA
molecular weight: 88331,06440 Da
isoelectric point:4,48905
aromaticity:0,11139
hydropathy:-0,20285

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
26–113
G3DSA:3.40.50.11780 DC_1098 IPR052042
G3DSA:3.40.50.11780
STR
26–115
G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287
IPR035089
TAS
545–688
IPR035089
QIN96899.1
1 808
Architecture
STR
STR
TAS
TAS
STR 26-115 | STR 143-656 | TAS 657-688 | TAS 693-790 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN96899.1
1 808
Domain Start End Length (AA) Confidence
N-terminal 1 164 164 0,8173
Central domain 165 431 268 0,4492
C-terminal 432 808 376 0,0957
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-164
Central
165-431
C-terminal
432-808

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN96899.1 [NCBI]
Genbank nucleotide accession
MT162467 [NCBI]
CDS location
range 22237 -> 24663
strand -
CDS
ATGGTTATTAAAACCGCCTCCCCTGGTATCGTCGTTCTTGAACACGACCTTACCAGAGGAACTAGTGATGCTATCACTACTAACATCGCCGCTTTCGTTGGTCCTTTCCAACGCGGCCCCGTGGATGAGCACGTTCTAATCAGCACTGAAGCTGAGTTCCAACGTGTATTCGGTGATCCTACCGACGACAACTACGAGTACTGGTGGACAGTCGCTAACTACCTTGAGTATGGCGGAGTCTGCTACGTTGTTCGTGCTGACGACTCAGTAGGAGACTCTTCCGGTACGTTCCTTCAGACGATGAAGAACGCCACCGATGAGATTGTTACCGATCCTTCTGACGAGCCAGTATACGTCAAGAATGAAGACGACTTCATTGAGAACTGGTTCCAGACGGCATCTGCACCTGGTAAGTTCATTGCTCGTGACCCCGGTACCTGGGCCAACGGCCTCGCCGTTGCCGTTATCGACCACGGTGCTGACTACCAGATGAGCCTCAAGACCACCGGTCAGCAAGTTATTGCTTCTGGTGACGACGCTGCTGCTACTGTCCGCTTCGACGACACTACCGTTCTCGGTTCTGTTGTTGGTGACTACATCAAGGTTGCTGCCCCTGCTGGTACTGCTACTCTTGTTGTTGGTGACCGTGTTGAAGCTTGGTTGTCTGGTGCTAGCGAAGGTGTTGCCTTCGTTATCAGCATTGACTCTGACAACTATCAGCTTCTCAAGATCTCCGGCGACTTCGCTGTTGGTTCTACCCTGACCCCTGCTAACTCGGCTGATACCCCCGGTACCACTGAGACCGGTGCTATCACCGCTGCTTTCCCCCAGGGTCAGTACAAGCTCTACAGCCTCGACGAAGAAGAGACCAGCGTTATCAACACTATCTTCGTACCTAACACTGTAACCAAGGCTGTTGGTGAAACCTACGGCTGGCCTGCTACCCCTATCGCTAACCAGAAGGTTACGACTGGTGGTCCTGCCGCCCTCGGCGACACTTACGTCTACAACCTGAACCTCGACGAGTGGGTTCTTAAGTACGAGCCCGCCACCGACGATCTGTTCGCTGACGGCACCAACGTCTTCCAGCTGAACGCTGCAGGCGACTGGTACACCCAGCAGGAAGCTTTCGCTGGTCTTCCCTGGTACCGCTTCGCTGGCCGTCCTGGTACTTCCCAGAACGCTGCTGAGCGTGGTTGTGTAAACGACGAACTGAACATCATCGTTTATGACGCCTCCGGTAACTTCACCGGAACCAAGGGTAACACCCTCGAAACCTACTTCGGTGTTTCTAAACTGCGTGGTGCTGTAACCCAAGAGGGTGACCGCAACTACTATATTGACTCTATCAACGCTCGCTCTGGTCACATTTTTGCTAACCAGACTCTTGCCGCCCCCGAGAACGGCATCAACTCCGGTCTTTCCGCTGTTGGTACTCAGATCGCTTCGGACGTTAAGTGTGAGTTCGTTGACGTTAAGTCCTACGTTCTCTCCCACGGTGTTGACAACTACAACATCTCCCTGGGTGAACTGCAGGACGGTTACAACAAGTTTATCCGTGAGAACGTTCCCGAGCTGGATTACATCCTGCAGGGTCCTGCCATGGGTAACCTCGACGACTCTGTCGCCAAGGCTAACTTCATCATCAGCCTCTGTGAAGAGCGTAAGGACTGCATGGCATTCCTGTCGCCCCCTCGCTACGCTGTTGTTGGCGCCTTCGACTCGATGACCGCTACCAACTCTATTATTGAGTGGGCCCACGAGCTGTCTTCCAGCTCCTACGCTGTCTTCGACTCCGGCTACAAGTACACCTACGACCGCTACAACGATCAGTATCGTTACATCCCTCTGAACGGCGACATCGCTGGTCTGATGGTTAACGCTTCTCTGACCGCTGAAGCTTGGTACTCACCCGCTGGTCTGTCCCGTGGACAAATCCGTAACGTAGTTAAGCTGCCTTACAACCCCTCCAAGACCCAGCGCGACCAGCTTTACACCAACCGTGTAAACCCTGTTGTTTCCTTCCCCGGTGAAGGTCACATCCTGTTCGGTGATAAGACCGCCCTCGGTTACAGCTCCGCTTTCGACCGTATCAACGTCCGTAAGCTGTTCCTGGTTATTGAGAAGGAAATCGCTAAGATCTCCCGCACGACTCTGTTCGAATTCAACGACGACGTAACTCGTTCGCTGTTCAAGAACAACGTCAACCCTTATCTCCGTGACATCCAGGCTAAGCGTGGTATGTATGACTTCCTGGTTGTTTGTGACAACACGAACAACACTCCTGAGGTCATCGACCGTAACGAGTTCGTTGCTGATCTCTACATTAAGCCTACGAAGTCGATCAACTTCATCACTCTGAACTTTATTGCCACTAAGACTGGCGTATCGTTCGATGAGTCGGTCGCTCTCTTCCGCGGCAACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
df917aff53a40b529e0691893c217acf9ac145e278570c8a21addd09991bf855
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank