Protein

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Genbank accession
QGF19739.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALYRRGTASMDADGTVHGTDTKWKDQLALIRVGATIVFLEQPIKLAVISDIVSDTELKAISTDGQTAADGKYVILLNDSLTVNGLAQNVAETLRYYQSKETEIAAAIDLINQLDMNKLEQIVADVNQAKSDSQAAQNQAELARDAANAARDETNSIKNQTQQIVDGAVGSINAAKDQAITDVQQKENSSITHIDSEEAAAIQAINDAKGDLSGYVNDAQTAAQTATSAKNDAQAARDEAVSSKDAAAVSAQEAKDAANSINAENLLTKDGNLAGLEDKKESRKNIGLGENDAANFLTINTTGAIGAGRNSWNGSNWGSQSMLSSLMIMSPDGISSPGIYVRKEHSDNGYAGTLLFYEGPNYFETNNRFRANQFLCQKTTMGYNQMWSASCFQGNAYTADSGAENYQSLISGSCDTRGQGYVGGVAFGMMTTGNPEWPRAQISVGAQDRDGEGNIGLQMHFRFMASGQISYVGQQGAGSFQQIPASDRNIKHSIKDDESSIAYNNIKSMRFRNFIFNDDEQERVRRGVIAQEIEEIDNLYVKRRMYESHELNGPKVERLELDTTPLLLDTMRALQDTIKKVEELQEEIKMLKSK
Physico‐chemical
properties
protein length:594 AA
molecular weight: 64626,76300 Da
isoelectric point:4,79200
aromaticity:0,06061
hydropathy:-0,52189

Domains

Domains [InterPro]
DC_1541
STR
78–513
DC_1541 Coil
Coil
Unmapped
119–153
Coil DC_0247
IPR030392
CHP
486–588
IPR030392
IPR030392
CHP
486–536
IPR030392
QGF19739.1
1 594
Architecture
STR
RBD
STR 78-513 | RBD 514-594
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGF19739.1
1 594
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,9929
Central domain 281 479 200 0,0576
C-terminal 480 594 114 0,9989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-479
C-terminal
480-594

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-3
[NCBI] 		2848075 Uroviricota > Caudoviricetes > Drexlerviridae > Tunavirus > Tunavirus Sfin3
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGF19739.1 [NCBI]
Genbank nucleotide accession
MN296515.1 [NCBI]
CDS location
range 29688 -> 31472
strand -
CDS
ATGGCTTTATACAGACGCGGTACTGCATCAATGGATGCAGACGGAACGGTTCACGGAACCGATACAAAATGGAAAGATCAGCTTGCTCTTATTCGCGTAGGTGCAACTATCGTGTTCCTTGAGCAACCAATTAAGCTGGCTGTGATTAGCGATATCGTTAGTGATACAGAATTAAAGGCTATCTCTACGGATGGTCAGACTGCCGCTGACGGTAAGTATGTGATCCTGCTTAACGATTCGTTGACTGTTAACGGATTAGCTCAAAACGTTGCTGAGACGCTTCGATACTATCAAAGCAAAGAGACTGAGATCGCGGCAGCTATAGATCTGATAAATCAGCTTGATATGAATAAACTTGAGCAAATAGTTGCTGATGTGAATCAGGCGAAATCTGATTCTCAAGCTGCGCAAAATCAGGCTGAATTAGCGCGTGACGCAGCCAACGCTGCACGCGATGAAACTAACTCAATCAAGAATCAGACGCAACAGATTGTTGACGGTGCTGTCGGTAGCATCAATGCGGCTAAGGATCAGGCTATAACCGATGTGCAGCAAAAAGAAAATTCATCCATCACTCACATTGACTCAGAAGAAGCGGCGGCGATTCAGGCAATTAATGACGCGAAAGGCGATCTGTCAGGTTACGTTAATGACGCTCAAACGGCAGCACAAACGGCTACCTCTGCAAAAAACGACGCTCAGGCAGCACGTGACGAAGCGGTAAGCTCAAAAGATGCTGCTGCGGTAAGTGCTCAAGAAGCTAAAGACGCAGCTAACAGCATCAATGCTGAAAATCTTTTAACTAAGGATGGAAACTTGGCTGGTCTTGAGGATAAAAAAGAGTCAAGAAAAAATATTGGGTTAGGTGAAAATGATGCTGCTAACTTTCTTACTATTAACACCACGGGGGCTATAGGTGCAGGAAGGAACTCATGGAACGGTTCTAACTGGGGTAGTCAGTCCATGTTGTCATCATTGATGATTATGTCACCTGATGGAATATCCTCGCCAGGGATTTACGTCAGAAAAGAACATAGCGATAATGGTTATGCTGGGACTTTATTATTTTATGAGGGACCAAACTACTTCGAGACTAATAATAGATTCAGAGCCAATCAGTTTTTATGCCAGAAAACAACTATGGGTTATAACCAGATGTGGTCTGCTTCATGCTTCCAGGGTAATGCTTACACCGCCGATAGTGGCGCTGAAAACTATCAATCACTTATTTCTGGATCGTGTGATACAAGGGGTCAAGGGTATGTTGGCGGCGTAGCTTTTGGCATGATGACTACGGGCAATCCTGAATGGCCCAGGGCACAAATATCAGTAGGCGCTCAAGATAGGGATGGGGAAGGCAATATTGGTTTGCAAATGCATTTCAGGTTTATGGCTTCAGGGCAAATATCTTACGTTGGACAGCAAGGGGCTGGAAGTTTCCAACAGATTCCGGCATCTGACAGAAATATAAAGCACAGCATAAAGGATGATGAATCAAGCATTGCATACAACAACATAAAATCAATGAGATTTAGGAACTTTATCTTTAACGATGATGAGCAAGAAAGGGTAAGGCGAGGTGTTATAGCTCAGGAGATAGAAGAGATCGACAATCTATATGTTAAGAGAAGGATGTATGAGAGCCACGAGCTAAACGGGCCAAAAGTTGAAAGGCTTGAGCTTGATACAACTCCTTTATTGCTTGACACTATGAGAGCTTTACAGGATACAATAAAGAAAGTTGAAGAGTTACAAGAAGAGATAAAAATGTTGAAGTCCAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ada042722933c0ed342e5a71da0db9f76e4c24e22b64aefef409db7fc163c29
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6877
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50