Protein

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Genbank accession
AGH07411.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADKFLQHDAAGGFREVEASNTGGAGKANKVVALDNSGRLDSTMMPTGIGAETSTIVAFGALAAGDFVNVYNDSGTSKVRKADASNGTAPANGFVLAAVVSGDPATVYWGGLNNQLSGLTPGRHFLSTTPGQSNHVAPAASGNIVQRLGIAVDANTIFFNPEDAILLV
Physico‐chemical
properties
protein length:168 AA
molecular weight: 17034,74590 Da
isoelectric point:5,15680
aromaticity:0,06548
hydropathy:0,04464

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH07411.1
1 168
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,7852
Central domain 18 157 141 0,0044
C-terminal 158 168 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-157
C-terminal
158-168

Taxonomy

  Name Taxonomy ID Lineage
Phage Sulfitobacter phage phiCB2047-B
[NCBI] 		754046 Uroviricota > Caudoviricetes > Schitoviridae > Raunefjordenvirus > Raunefjordenvirus CB2047B
Host Sulfitobacter sp. CB2047
[NCBI] 		1525218 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Sulfitobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07411.1 [NCBI]
Genbank nucleotide accession
HQ317387 [NCBI]
CDS location
range 52616 -> 53122
strand -
CDS
ATGGCTGATAAATTTCTACAACATGATGCTGCTGGAGGTTTCCGTGAAGTCGAAGCTTCTAATACAGGTGGCGCAGGTAAAGCTAACAAAGTCGTAGCACTTGATAACTCAGGTCGTCTCGACTCTACAATGATGCCTACAGGTATTGGTGCTGAAACCAGTACGATTGTAGCATTTGGTGCTCTGGCTGCTGGTGACTTCGTTAACGTGTACAACGATTCTGGTACATCTAAAGTACGTAAGGCTGATGCCTCTAATGGCACTGCTCCTGCTAATGGTTTTGTACTGGCTGCTGTTGTAAGCGGTGATCCTGCTACAGTCTATTGGGGTGGTTTGAATAACCAACTCTCAGGACTGACTCCGGGGCGTCACTTCTTGTCTACAACTCCGGGGCAATCTAACCACGTTGCACCTGCTGCTTCAGGCAATATCGTACAGCGTCTTGGTATTGCTGTTGATGCAAACACTATCTTCTTCAATCCAGAAGACGCAATCCTACTCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c7fec49e7a4a40f4fff9099a17dcb476daab0791e68906d06ca7142aabf0e45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Sulfitobacter phage pCB2047-B Henn,M.R., Buchan,A., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank