Protein
View in Explore- Genbank accession
- QBX19547.1 [GenBank]
- Protein name
- tail fibers protein
- RBP type
-
TFTSP
- Protein sequence
-
MYEFNDTIRGTPKVTFNLKTTIGGKVLEDELNNGFGTFRTLTVSGRDVVDLEHQTTSVLGRNGEYFHNATVEVRKLEIKAKISGKDNKSMRLQYEKLNKLIVSHNQVFLSFSDEPDRNYLGIFKSKDVPEEVSNEQIIGLTFICYNPFKMSDVKTKKGTSIQNGGLFQTKPIITLNLSSPTKEIKLLHVESQKYIRLTGTYTTDEIKIDMATGKITQNGRNILGDLDMINSRYFELLPGNNTLQCANAAITAEFREVYL
- Physico‐chemical
properties -
protein length: 259 AA molecular weight: 29278,03320 Da isoelectric point: 8,35654 aromaticity: 0,08494 hydropathy: -0,41158
Domains
Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–150
ATT
1–150
IPR008841
STR
30–144
STR
30–144
IPR006520
Unmapped
38–149
Unmapped
38–149
DC_1533
STR
75–258
STR
75–258
1
259
Architecture
ATT 1-150 | STR 151-258 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
259
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 257 | 257 | 0,8141 |
| Central domain | 258 | 257 | 1 | 0,0366 |
| C-terminal | 258 | 259 | 1 | 0,8916 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (1 AA) is still below minimum (10 AA). Sequence may be too short.
C-terminal too short, adjusted boundary|CONSTRAINT VIOLATION: Final C-terminal (1 AA) is still below minimum (10 AA). Sequence may be too short.
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-257
1-257
Central
258-257
258-257
C-terminal
258-259
258-259
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Streptococcus phage Javan489 [NCBI] |
2548204 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
QBX19547.1
[NCBI]
Genbank nucleotide accession
MK448775.1
[NCBI]
CDS location
range 31682 -> 32461
strand +
strand +
CDS
ATGTACGAATTTAACGATACTATCAGAGGTACTCCGAAAGTTACTTTTAATTTAAAGACAACAATTGGTGGAAAGGTATTAGAAGACGAACTCAATAATGGTTTCGGTACCTTTAGGACATTGACTGTTTCTGGTCGTGATGTGGTGGACTTAGAGCATCAAACAACAAGTGTGTTAGGACGAAACGGAGAGTATTTCCACAATGCCACAGTTGAAGTCAGAAAACTAGAAATAAAAGCTAAAATCAGTGGAAAAGATAACAAGTCAATGCGTTTACAATATGAAAAATTAAACAAATTAATTGTTAGTCACAATCAAGTTTTTTTATCATTTTCAGACGAACCTGACAGAAATTATCTAGGCATCTTTAAATCTAAAGATGTCCCAGAAGAAGTTTCTAACGAGCAGATTATAGGACTAACATTCATCTGCTACAATCCGTTTAAAATGTCTGATGTAAAAACTAAAAAAGGAACATCTATCCAAAATGGTGGGTTATTTCAAACAAAGCCTATCATCACTCTCAACCTATCATCACCAACAAAAGAAATTAAGTTGTTGCATGTCGAAAGCCAGAAGTATATCAGATTGACTGGAACTTATACCACTGACGAAATCAAGATTGATATGGCCACGGGTAAGATTACCCAGAACGGACGCAATATCCTTGGCGATTTAGATATGATTAATAGTAGGTATTTTGAGCTATTACCTGGTAATAATACATTACAGTGTGCCAATGCCGCCATAACCGCAGAGTTTAGAGAGGTTTATCTATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
f438abb2f82a8930ed0aaa746952c58c25340711654735e8f72139ad32836c1f
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50