Protein

View in Explore
Genbank accession
WPK40879.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MTDLIKLLPQDSHASLVAYNQFDIHTPKQVVADGKTLYELLEDLGFVKWDDAACKYERLTPFVVQLNGDWLLESEGQFDYMVQPGDAIRVERLAGKGKKGGSKGLGIITAIAAIVAAPFTGGASLWLLVASAALLMPGMAGVPKPQAANLSGKDGASPTYSLTSSGNQARLLSAVPRLYGRMRFTPDLASQPYTEFEGNEQYLYQLFALSCGEVELHNIYMDQTPLGNFTDVKTELVQPYQAVTLFPDNVVTSEAVQGIKLENGLLSGPYIVGQPGTITTRVGLDFVWPGGCYHIDDQGNVRSSSVTLTTYIQQVNDQGQLVGQRRELGTGTQSFATQTPQRITHIIDVPPGRYALWATRAGLSNQDNSRIQNDVQWAGLRAYLKRDDGFNYGNVTLLALKMKATEVLNSSTMRAFTVEATGKVQTWSPAGGWTPKPVADNTITWAAADILHNADYGKGLATSRIDMAGLYRLHDIWKSRGDTFNGIFDTTISVWEALQKVLRAGRAAPIYYAGKVEFIREEPQSLPVQMFQPRNIVQGSLSFDYNWPTSSTPNYVIIQYLDSTTWTRKEVECKLPNVAATKAATVELFGVTNRDQAYREGMFLAASNRYRRRNIRFSVEMEGQIVRYNNLIQISHDVADWGYSGVVKSFNAQTGVLRTTEPILFPNNNCVIAFRKRDGSAHGPFPITPDPSLVNEPNSFGCIVGGTVAQRQAIYISDGVRSERTLYQAGPVGKAGLKALVNKVQARGDDTYNITALEYIPHIYTMENGLPVPPPESGSNLPRPPVGPIVDQITVTETTNAGEQAIQWTPAVGATSYQLQYSIAAMEWNTLVDSTQRTAILANIPPGEVQVRVRAIGATAGPWATWSGELSGSALGLPEIAKLETVPGMWSVGITWELTPNSKIIAAYTTIVVSTDPLPGPANSKVLGEYAYPITSAVLDNVQPGQRIYVFAAVTDKAGRQGPWYNNMGAVEGKPTEDPNLLLPYLTEQIGRSQLTKAMRDEIDSIIEGGEGLQSQITNLATQTTDGFTAVAAQFNTVQAQIDNQNTAIAQITQEVEATLDGAMKSLITLRTQLRSDGKLITAGIGIGVVPDFNDPTQHNSEIILQAGRIAFTTSQINDPLVTPLVVEGNNVYMHGAFIRQATIASAQIADASISTAKIQDLSVDTIKIAGNAVTIPNYNRWDEEWQGSPDMRTCLSLNLVLPNYGGVVVTWTSVMHTNGTVPYRFRILVDGAVEMDTGLHEWAQSSLTLSIGRFFNAGTYNIEVQCQAPGAPGRFVKLTYQNLLAQAAMR
Physico‐chemical
properties
protein length:1291 AA
molecular weight: 140597,36760 Da
isoelectric point:5,42241
aromaticity:0,08443
hydropathy:-0,16274

Domains

Domains [InterPro]
DC_0129
STR
3–1084
DC_0129 DC_1315
NF040662
Unmapped
276–764
NF040662 IPR013783 IPR015406
IPR055385
ATT
277–382
IPR055385 IPR032876
IPR053171
Unmapped
336–1005
IPR053171
WPK40879.1
1 1291
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 3-276 | ATT 277-382 | STR 383-492 | ATT 493-622 | STR 623-1084 | RBD 1085-1291
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Knedl
[NCBI] 		3096258 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK40879.1 [NCBI]
Genbank nucleotide accession
OR805297.1 [NCBI]
CDS location
range 22079 -> 25954
strand +
CDS
ATGACTGATCTCATTAAACTGCTGCCGCAAGACAGCCATGCAAGCCTTGTGGCTTACAACCAGTTTGACATCCACACGCCCAAGCAAGTGGTCGCGGATGGTAAAACTCTGTACGAGTTGCTCGAAGACTTGGGCTTTGTCAAATGGGACGACGCGGCTTGCAAGTATGAGCGCCTGACGCCGTTTGTTGTTCAGCTCAATGGAGACTGGTTGCTGGAGTCCGAGGGTCAATTTGACTACATGGTGCAACCCGGCGACGCTATCCGTGTCGAGCGCCTTGCGGGCAAGGGTAAGAAGGGTGGCTCCAAGGGCCTGGGTATCATTACCGCCATCGCCGCCATCGTAGCCGCGCCGTTCACTGGCGGTGCTTCCTTGTGGTTATTGGTTGCCTCTGCCGCCCTGCTGATGCCCGGTATGGCGGGCGTACCCAAGCCCCAGGCGGCCAACCTGAGCGGCAAGGACGGGGCTAGCCCTACCTATAGCCTTACCAGCAGCGGCAACCAGGCGCGCTTGCTGAGTGCCGTACCGCGCTTGTACGGGCGCATGCGCTTTACCCCCGACTTGGCCAGCCAGCCCTACACCGAGTTCGAAGGTAACGAGCAGTACCTCTACCAGTTGTTCGCACTGTCCTGCGGTGAAGTGGAGCTTCACAACATCTACATGGACCAGACCCCGCTCGGCAACTTTACCGACGTCAAGACCGAGCTTGTGCAGCCGTACCAGGCGGTGACCCTGTTCCCGGACAACGTCGTTACGTCTGAGGCAGTGCAGGGCATCAAGCTGGAGAACGGCCTTTTGTCTGGTCCGTACATCGTTGGCCAGCCTGGCACCATTACAACCCGCGTGGGCCTGGACTTTGTTTGGCCGGGTGGTTGCTACCACATTGACGACCAGGGTAACGTACGCTCGTCCAGTGTTACGCTAACCACATACATTCAGCAAGTCAACGACCAGGGCCAATTGGTTGGTCAGCGTCGTGAGCTGGGTACGGGTACGCAGAGCTTCGCCACGCAGACGCCGCAGCGAATCACGCACATTATTGACGTGCCACCGGGGCGCTACGCACTGTGGGCCACCCGTGCGGGCCTGTCCAACCAAGACAACAGCCGCATCCAGAACGATGTCCAATGGGCTGGCTTGCGCGCATACCTCAAGCGCGACGATGGGTTCAACTACGGTAACGTAACCCTGCTGGCCCTCAAGATGAAGGCTACCGAGGTGCTCAACAGCAGCACCATGCGAGCCTTCACCGTGGAAGCTACTGGCAAGGTGCAAACCTGGAGTCCTGCTGGTGGCTGGACGCCCAAGCCGGTTGCCGACAATACCATCACATGGGCTGCTGCGGACATCCTTCACAACGCCGACTATGGCAAAGGCCTGGCTACGTCCCGCATCGATATGGCGGGGTTGTACCGTCTACACGACATTTGGAAGTCGCGGGGTGACACGTTCAACGGCATCTTCGACACCACGATTTCCGTATGGGAAGCACTGCAAAAGGTTCTGCGCGCCGGGCGCGCTGCGCCAATTTACTACGCCGGAAAAGTAGAGTTTATCCGCGAAGAGCCACAGTCCCTGCCCGTGCAGATGTTCCAACCGCGCAACATTGTACAGGGCTCGCTGAGCTTTGACTACAACTGGCCGACCAGCAGCACACCCAACTATGTCATCATCCAATACCTGGACAGCACCACTTGGACCAGGAAAGAGGTAGAGTGCAAGCTGCCCAACGTTGCCGCAACCAAAGCTGCTACGGTAGAGCTGTTCGGCGTCACCAATCGTGACCAGGCCTATCGGGAAGGCATGTTCCTGGCCGCAAGCAACCGTTACCGCCGCCGCAATATCCGGTTCAGCGTTGAGATGGAAGGGCAGATTGTTCGCTACAATAACCTCATCCAAATCAGCCACGACGTGGCGGACTGGGGCTATAGCGGTGTGGTTAAAAGCTTCAATGCTCAGACTGGCGTGCTTCGTACCACAGAGCCGATCCTGTTCCCTAACAACAACTGCGTCATTGCCTTCCGCAAGCGGGATGGCAGTGCCCACGGCCCCTTCCCTATCACCCCGGACCCGTCGCTGGTCAACGAGCCAAACTCGTTCGGTTGCATCGTTGGTGGCACCGTAGCGCAGCGCCAGGCTATCTACATCAGCGACGGTGTCCGTAGCGAGCGAACGCTCTACCAGGCCGGCCCTGTGGGCAAGGCCGGGCTCAAAGCTCTGGTCAACAAGGTGCAAGCACGGGGAGATGACACGTACAACATCACCGCCCTGGAATACATTCCCCATATCTACACCATGGAGAACGGCCTGCCGGTACCTCCCCCGGAAAGTGGGTCCAACCTACCTCGCCCACCAGTTGGCCCCATCGTTGACCAGATTACGGTTACTGAGACAACCAACGCTGGCGAGCAAGCCATTCAGTGGACCCCAGCAGTGGGCGCCACTTCATACCAGTTGCAGTACTCCATTGCAGCTATGGAGTGGAACACGCTAGTTGACAGCACGCAGCGTACCGCAATCCTGGCCAACATTCCACCAGGAGAAGTTCAGGTGCGCGTGCGCGCAATTGGCGCCACAGCCGGCCCGTGGGCTACGTGGTCGGGGGAGCTGAGTGGCTCCGCCCTGGGCCTTCCTGAAATTGCCAAGCTGGAAACAGTTCCGGGCATGTGGTCAGTAGGCATTACCTGGGAGCTAACCCCCAACAGCAAAATCATTGCGGCCTACACCACTATCGTTGTATCCACCGACCCGCTCCCGGGACCGGCTAACTCCAAGGTGCTTGGCGAATACGCGTACCCAATTACCAGCGCTGTACTGGACAACGTCCAGCCTGGCCAGCGCATCTATGTATTTGCTGCGGTGACGGACAAAGCTGGTCGGCAAGGCCCCTGGTACAACAACATGGGTGCGGTGGAAGGTAAGCCCACCGAAGACCCCAACCTGTTGCTTCCGTACCTGACCGAGCAGATTGGCCGCAGCCAGCTTACCAAAGCTATGCGTGATGAGATCGATAGCATTATCGAGGGCGGTGAGGGCTTACAGAGCCAGATCACCAACCTAGCCACACAGACGACTGACGGCTTTACCGCAGTAGCCGCTCAGTTCAACACCGTGCAGGCACAAATCGACAACCAGAACACTGCTATTGCTCAAATCACCCAGGAAGTGGAAGCCACTCTTGACGGTGCAATGAAGTCCCTCATCACCCTTCGTACACAGCTACGCAGTGACGGCAAGCTGATTACTGCGGGTATTGGCATCGGGGTGGTACCGGACTTCAATGACCCGACGCAGCACAACAGTGAAATCATTCTTCAGGCTGGGCGGATTGCCTTTACCACCAGCCAGATTAATGACCCGTTGGTAACCCCGCTTGTGGTAGAAGGTAATAACGTGTACATGCACGGCGCCTTCATTCGGCAGGCTACCATCGCCAGCGCGCAGATTGCCGACGCGTCTATTAGCACTGCCAAGATCCAGGACCTGTCGGTTGACACAATCAAGATTGCGGGTAACGCGGTTACCATCCCCAACTATAACCGTTGGGACGAAGAGTGGCAGGGTAGCCCCGATATGCGCACCTGCCTATCCCTCAATCTGGTGCTGCCCAACTACGGCGGTGTTGTGGTTACGTGGACCTCTGTCATGCATACTAATGGCACTGTGCCATACCGCTTCCGCATCCTGGTTGACGGGGCGGTTGAGATGGACACCGGCCTTCATGAATGGGCACAGTCCAGCTTAACCCTCAGTATTGGGCGCTTCTTCAATGCGGGCACTTATAACATTGAAGTACAATGCCAGGCTCCGGGTGCCCCAGGGCGCTTTGTTAAGCTAACCTACCAGAACCTTCTTGCACAGGCGGCAATGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fdf9f2042fef7fef46b33edc4d60dd15f0c304137009f229db6d67472eeb8b35
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7600
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Pseudomonas phage Knedl Maffei,E., Manner,C., Jenal,U. and Harms,A. 2024-04-11 — GenBank