Protein

View in Explore
Genbank accession
CAP45420.1 [GenBank]
Protein name
putative L-glutamine-D-fructose-6-phosphate amidotransferase
RBP type
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MCGLVGFCATTNASDNEIALLKSLLAVDIIRGAHATGLAKIDPVKNEVGIHKRAVDAYDFLADPETKEFLDKGRARIYIGHNRYATMGDKTDHGNAHPFQVDHITMVHNGTVDTWGLHLLDGNDKYNVDSNMLCATIANHGAKKTFEEKFSGAAAVVWWDSKERSLNFIRNEDRPLFMAVTTTGTIVWASEPGMLKVFLERPNAKIRLRSPIAELKAEVLVTIPFTEAGVRKGAEPQTTPVTFLDLPIPESERQAAAWWSRYVGVSDYDDYSRSQSSQAGTKGSQAGSSYGTTGDAYARNTLRINNNLDAAGSTFKHRQLVTFDVVKIEAYANGSEYGTVTGIEREENLLIEAHGINVSKVHGYTVLRGSISNAYFIGQDRDLKVTVEDLAVSCLDPKHRPTPGETTPVLRIGTISSETKSHSKPRVQVGGTSGNTPPANITYPLKVQGHTFNNVHVFRDFVSQGCASCGKIPTAYDQRNRHLTVYEGAKFTGSLDECEFICGECVIENK
Physico‐chemical
properties
protein length:510 AA
molecular weight: 55874,14950 Da
isoelectric point:6,39106
aromaticity:0,08039
hydropathy:-0,34961

Domains

Domains [InterPro]
IPR029055
ATT
2–199
IPR029055 DC_0532
cd00352
STR
2–198
cd00352
IPR029055
ATT
2–239
IPR029055
IPR017932
STR
2–226
IPR017932
IPR029055
ATT
2–240
IPR029055
PF13522
STR
74–191
PF13522
CAP45420.1
1 510
Architecture
ATT
STR
ATT 2-240 | STR 241-510
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAP45420.1
1 510
Domain Start End Length (AA) Confidence
N-terminal 1 132 132 0,2371
Central domain 133 458 327 0,6904
C-terminal 459 510 51 0,7679
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-132
Central
133-458
C-terminal
459-510

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage LUZ24
[NCBI] 		484895 Uroviricota > Caudoviricetes > Bruynoghevirus >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAP45420.1 [NCBI]
Genbank nucleotide accession
AM910650 [NCBI]
CDS location
range 9902 -> 11434
strand +
CDS
ATGTGTGGATTGGTAGGCTTCTGTGCCACAACTAACGCGAGTGATAACGAAATCGCTCTTCTCAAATCCCTCCTGGCCGTGGATATTATCCGTGGTGCTCACGCCACCGGTTTGGCCAAGATCGACCCGGTTAAGAACGAGGTAGGAATTCACAAGCGGGCAGTAGATGCCTACGACTTCCTGGCTGATCCTGAAACCAAGGAGTTCCTGGACAAGGGTCGGGCTCGCATCTACATAGGTCACAACCGTTACGCCACGATGGGCGACAAAACGGACCATGGAAATGCCCACCCCTTCCAGGTAGACCACATCACCATGGTACATAACGGCACCGTGGATACCTGGGGACTGCACCTGCTGGACGGCAATGATAAGTACAACGTGGACTCCAACATGCTGTGCGCTACCATTGCCAACCACGGTGCCAAGAAGACGTTCGAGGAGAAGTTCTCTGGTGCTGCTGCGGTTGTCTGGTGGGACTCCAAGGAACGTAGCCTGAACTTCATCCGTAACGAAGATCGTCCTCTGTTCATGGCGGTTACCACCACCGGGACCATCGTATGGGCATCGGAGCCTGGGATGCTCAAGGTTTTCCTGGAGCGACCCAATGCTAAGATCCGCCTGCGTTCTCCCATCGCTGAACTGAAGGCCGAAGTCCTGGTAACCATCCCGTTCACGGAGGCCGGAGTGCGAAAGGGTGCAGAACCCCAGACCACTCCGGTCACGTTTCTGGATCTCCCGATTCCCGAAAGCGAAAGGCAAGCAGCGGCATGGTGGAGTCGCTACGTCGGTGTCTCGGACTACGATGACTACAGCCGAAGCCAAAGCAGCCAAGCGGGAACGAAAGGCAGCCAAGCGGGCTCGTCGTATGGAACGACTGGCGATGCGTACGCAAGGAACACCCTCCGGATCAACAACAATCTCGACGCAGCAGGTAGCACCTTCAAGCACCGGCAACTCGTCACCTTCGATGTTGTCAAGATCGAGGCCTACGCAAATGGCAGCGAGTACGGAACTGTCACTGGAATCGAGCGTGAAGAAAACCTTCTCATCGAAGCTCATGGCATCAACGTCTCCAAAGTCCACGGATACACCGTCCTCCGAGGGAGTATCTCCAATGCCTACTTCATCGGACAAGACCGTGATCTCAAGGTTACTGTCGAGGATCTGGCGGTAAGCTGCCTGGACCCAAAGCATCGGCCGACTCCTGGGGAGACTACCCCAGTGTTGAGGATTGGAACGATCTCATCGGAGACGAAATCCCATTCTAAACCCAGGGTTCAAGTCGGCGGCACCTCGGGGAACACCCCTCCGGCCAACATCACCTACCCCCTGAAGGTGCAAGGCCACACCTTCAACAACGTGCATGTCTTTCGGGACTTCGTGTCCCAGGGATGTGCATCTTGCGGGAAGATCCCAACCGCATATGACCAGCGTAACCGTCATCTGACTGTATACGAAGGTGCCAAGTTCACTGGTAGCCTGGATGAGTGTGAGTTCATCTGTGGCGAGTGTGTAATTGAAAATAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d94465002bfd42c273dcf51924c9ecfb20ce14cc1b35a2055fc9f8f50131e7bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5833
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of the genome, proteome and transcriptome of Pseudomonas aeruginosa phage LUZ24 Ceyssens,P.J., Demeke,M., Lavigne,R., Ackermann,H.W., Noben,J.P., Volckaert,G. and Hertveldt,K. 2015-11-06 — GenBank