Protein

View in Explore
Genbank accession
YP_009618340.1 [GenBank]
Protein name
tail fiber protein; host specificity
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAITGPWVGSSAVAETGMRWGTDQRVAVRLSYNGWYSELIGRSKEVILELTENTSYNKDWLIDWLRAQGGTPAVINVRGNMVSYSENVPTFEFPADLPNAYVTLNNYSAIWGRGGRGAGGGSGFANNATAGGTAINNQIGGRLRINNAGQIGGGGGGGGTYNEKAIGAVLYGAGGGFPMGAGGAGFFAAGAAGSLSGPGAGGTTGYPEHGGSGGWAAQAGVMGVGSVSAPPLWPAGGGAAVVGNAPVWSAVGTVHGSRV
Physico‐chemical
properties
protein length:259 AA
molecular weight: 25710,16120 Da
isoelectric point:7,98623
aromaticity:0,09266
hydropathy:-0,03668

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_1679
STR
4–170
DC_1679
YP_009618340.1
1 259
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-170 | RBD 171-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CF1 ERZ-2017
[NCBI] 		2267236 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Moonvirus
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009618340.1 [NCBI]
Genbank nucleotide accession
NC_042067.1 [NCBI]
CDS location
range 161139 -> 161918
strand +
CDS
ATGGCTATTACAGGCCCGTGGGTTGGAAGTAGTGCTGTAGCCGAAACAGGCATGCGTTGGGGTACAGATCAACGTGTAGCAGTAAGATTATCCTATAATGGATGGTATTCTGAATTAATAGGCAGGTCAAAAGAAGTTATTCTTGAATTGACCGAAAATACATCATACAATAAAGACTGGCTTATAGACTGGCTTAGAGCTCAAGGTGGTACTCCTGCTGTTATAAACGTTCGTGGCAATATGGTATCTTATAGCGAAAATGTTCCTACATTTGAATTCCCTGCTGATCTCCCGAATGCATATGTTACTCTTAATAACTATTCAGCTATTTGGGGAAGAGGCGGACGTGGCGCGGGCGGCGGATCTGGGTTTGCTAATAATGCTACTGCGGGTGGTACTGCTATTAACAATCAAATAGGTGGCCGTTTAAGAATTAATAACGCTGGGCAAATCGGTGGCGGCGGTGGCGGCGGCGGGACCTATAATGAAAAAGCAATAGGTGCAGTTTTATATGGTGCGGGTGGTGGATTCCCGATGGGTGCGGGTGGCGCCGGTTTTTTTGCTGCAGGTGCTGCAGGATCTTTATCGGGACCTGGCGCAGGAGGTACAACAGGATACCCTGAACATGGCGGCTCAGGAGGTTGGGCTGCCCAGGCTGGAGTAATGGGTGTTGGTTCTGTTTCTGCTCCTCCACTTTGGCCTGCAGGTGGAGGAGCTGCGGTTGTAGGGAATGCTCCTGTTTGGTCGGCTGTTGGTACAGTACACGGCTCTAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5b890c78e7eb298cdad7e0b68717dfb40062a9dac0214b46bf992b8fd141b8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8267
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank