Protein

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Genbank accession
AFQ22285.1 [GenBank]
Protein name
YadA domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MATKIIVQQVLPYEDSLTVSKYPKYTIQLATSIGGLTAAEMAGYVEQAQTAAEQADSSANTAQGFANSASTSATQAASSASTAAVNAVDAASAASSASDARDEVVAIKDDAIAAVNDAAEDIIEQVGESVTVAQNAAASALASATTATTKAAEASSSAISASNSRTIAQNSATSAQTSATTATTGANTATTKASEATTAATTATTAATTATTKAGEALASATTASTGATTATTKAAEASTSATTASTAATTATTASTSASASATSAQSAATTATTGATTATTKANEASASATTASTGAATATTKATEATTAATTATGRATAAANSATAALASQNAATEAATSAQTAAASVATAAEDVEEYATQAAASEVNSKASELAAHTSELNAKASELAAKTSETSAAVSAASADEDATTAAESATSAQTSATAATTAATTATTKAAEALASATSATESATTASDAATTATTGASEATNSATAAKESEDNAKDSEEAAVAASTTASSASTAAVNASTNATAKATEATEAATSATASSQQAANSATSAQTSATTATTKATEASASAVTATTGATTATTKATEASSSASNALASANAAQASATSASTSATAATNSATAAAAASNVATEAAADSLEYSNNSSDSATSAQTSADTATTKAAEALASANTATLGAQASDSSKVAAQAAQEAAEEAAASAANSAIIAGTRYPISQILDVSTFEAPTAATDSGVASGYGAKVTGNTGVAFGYKSISLQGTAIGYQASVTGTGITIGRGSVTSTGVTIGNTSSAGAGTSIGNNAKSVGGVSLGDTAESTDTGVAIGNNAKSGGTSLAFGTSSVSTGNGVAMGDGANAVDTGVSIGAGTYADEANTTVVGAYSGAYVPNSIIIGNNSFTNNAPDGIIIGSGSNSYGGTAIGNNVRAYGPKGIVIGANQHGYGQSISIGNQANVTYKNNEDGTDPSGGLQDYISYGIAIGASGSDYATADYPFDYGETVAYHNSIAIGTNSHARTKKVDYNAQAIALGFCANAYGNYSVAIGSYSTAGTYASGDNYDDAPVVSFGGGVGTTKVPTRRLINVTDPINPNDAATKAYVDANISGGGFEPISVLDFLEESSDTVELPFSMVGGGLTLSLKWVVTKSTDTVTCSLQRVGSSPAPSAPASMDIIYTRQSTPSSEGSISTIGRSIAGAMITVDTPSFEVFNIEGANVDSHVCTMHIKEGITQNNCMQFTMTITPYGSDNYRVLIWGIPTRTA
Physico‐chemical
properties
protein length:1238 AA
molecular weight: 119823,04610 Da
isoelectric point:4,32035
aromaticity:0,03958
hydropathy:-0,06866

Domains

Domains [InterPro]
IPR011049
STR
794–900
IPR011049 IPR011049
DC_1611
STR
1057–1226
DC_1611
AFQ22285.1
1 1238
Architecture
STR
STR
STR 794-900 | STR 924-1226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFQ22285.1
1 1238
Domain Start End Length (AA) Confidence
N-terminal 1 175 175 0,9207
Central domain 176 1055 881 0,6957
C-terminal 1056 1238 182 0,9468
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-175
Central
176-1055
C-terminal
1056-1238

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage My1
[NCBI] 		1204539 Uroviricota > Caudoviricetes > Demerecviridae > Myunavirus > Myunavirus My1
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
dbc1a953ad6747e15a74cd1b7691063451562d1790100be6678be7e1cb719c18
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50