Protein

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Genbank accession
XBS47573.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKTNLKLAAVFTLAFALAACGGGGGGSNDASNPNDHGDQPQVVTRGTAAIGAPIIGATVTFKCVTGDSHTAQTDANGLYTATLSQDDYPCAIQVAGGQANGQALSQALYSVAPAPGTSNITPLTDAMVGAMAGQAPADFFNGATSGSLSGSITADKLSASLAKVAAAIQTLPGQLKLADGFNPINSTFGAVKGDANDALLDQYATSLKAAGLTQNDVTAKVATADTTLTKQAFSAIAFTTPNLTSFNIGSSINLDNTFGIAITDPNRGSLSAKANIDANGNVTSFTDAGSFTGVISTLGNRVGMLCASNNGTSQGQYVFASTDLTEVTDATELAGKQFDEYQDCSKKDVATWDGAGNVQYSNGESDSAMFPAFQSAGKPVDGAVVHYKAYKGTVNGQLTYVYLLVSNQLGNNAALIDGNNNYVMVGVQRFPS
Physico‐chemical
properties
protein length:432 AA
molecular weight: 43883,00720 Da
isoelectric point:4,53123
aromaticity:0,07176
hydropathy:-0,03958

Domains

Domains [InterPro]
PS51257
STR
1–20
PS51257
XBS47573.1
1 432
Architecture
STR
STR 1-20 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_BgluM-SURPRISE13
[NCBI] 		3159457 No lineage information
Host Burkholderia glumae LMG 2196 = ATCC 33617
[NCBI] 		1176492 Pseudomonadota > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia glumae LMG 2196 = ATCC 33617

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBS47573.1 [NCBI]
Genbank nucleotide accession
PP856017.1 [NCBI]
CDS location
range 27411 -> 28709
strand -
CDS
ATGAAAACCAATCTCAAATTGGCCGCAGTTTTCACGCTGGCATTCGCACTCGCAGCATGCGGTGGTGGTGGCGGTGGTAGCAACGACGCAAGCAATCCGAACGACCACGGCGATCAACCGCAAGTCGTCACTCGCGGCACCGCAGCAATCGGCGCACCCATCATCGGTGCGACCGTGACGTTCAAGTGCGTGACGGGCGATAGCCATACCGCCCAGACCGACGCAAACGGCCTCTACACGGCCACGCTGAGTCAGGACGACTATCCGTGTGCCATTCAGGTGGCAGGCGGTCAGGCGAACGGCCAGGCCCTTTCCCAGGCATTGTATTCGGTGGCTCCTGCTCCGGGTACGTCGAACATCACGCCGCTCACGGATGCGATGGTCGGTGCAATGGCAGGGCAAGCTCCGGCAGACTTCTTCAATGGCGCAACGTCGGGCAGTCTGTCGGGTAGCATCACCGCAGACAAGCTCTCCGCTTCGCTCGCGAAGGTCGCTGCAGCGATCCAGACTCTGCCGGGCCAACTGAAGCTGGCAGATGGCTTCAATCCCATCAACTCGACCTTCGGCGCTGTGAAGGGGGACGCGAACGACGCACTGCTGGATCAGTACGCTACGTCGCTTAAGGCGGCCGGTCTCACGCAGAACGACGTTACGGCGAAGGTTGCAACCGCGGACACGACGCTCACCAAGCAAGCGTTCTCGGCTATCGCTTTCACCACGCCCAACCTGACCAGCTTCAACATCGGTTCGTCCATCAACCTGGACAACACGTTCGGCATCGCCATCACGGATCCGAATCGCGGTTCGCTGTCGGCGAAGGCTAACATCGACGCCAACGGCAACGTGACGTCGTTCACCGATGCAGGTTCGTTCACCGGCGTCATCTCGACGCTGGGTAACCGTGTGGGCATGCTGTGTGCTAGCAACAACGGCACGAGCCAAGGCCAATACGTGTTCGCATCGACCGATCTGACCGAAGTCACCGACGCGACGGAGCTCGCCGGCAAGCAATTCGACGAATACCAGGATTGCTCGAAGAAGGATGTCGCAACGTGGGACGGCGCTGGCAACGTTCAGTATTCGAACGGCGAAAGCGATTCGGCCATGTTCCCGGCATTCCAGTCGGCAGGCAAGCCGGTTGACGGTGCAGTGGTTCACTACAAGGCCTACAAGGGCACTGTTAACGGACAGCTGACTTACGTCTACCTGCTCGTGTCGAACCAGCTGGGCAACAACGCCGCACTCATCGACGGTAACAACAACTACGTCATGGTCGGCGTTCAACGCTTCCCGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05fa366db1616fc91bd9ed44e8b61a4c6072c90542656afce0907f09be7bb8c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9178
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the novel Burkholderia jumbo bacteriophage Surprise13 Supina,B.S.I. and Dennis,J. 2023-10-26 — GenBank