Protein

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Genbank accession
XQP12966.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPIEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGRGSVVVGAYMESVTTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKDQNISSVLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVLYPVWDGFDLGADTDMNPEADRPGDYSVSQYPVHMLPLNHLIDNLLVRGCLGVGFDMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAVIDTNTKDFPANQIYISGACRVNGLRLVGIRSTTEQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNGSAALRFRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAISGSLPDAVSLKINRGDYRAVEIPVAVSTLPDNAVRDNGAISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 73005,67780 Da
isoelectric point:4,93649
aromaticity:0,08772
hydropathy:-0,16126

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
92–132
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
XQP12966.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQP12966.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9940
Central domain 155 594 441 0,9878
C-terminal 595 684 89 0,8311
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-594
C-terminal
595-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SalM-TTS6
[NCBI] 		3402120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella gallinarum
[NCBI] 		594 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQP12966.1 [NCBI]
Genbank nucleotide accession
PV068287.1 [NCBI]
CDS location
range 16145 -> 18199
strand -
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATAACCGGCAAACAGGGTGGTGTAGCGGGTGGCGCAGATATCGACTACGCTACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCCGCGGTTTTACGTGATGCTGGTTTCTCCCCAGCATCTTTCAACTTCACAACCGGCGGGACGCTAGGGGTTAACGACGCGGATAAAGCGGTTCTTTGGCCTATTGAAGACGGCGGAGACGGTAACTATTACGCATGGCGCGGGTCTCTCCCTAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGTGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTTCGCGCAGAAGCGGATAAGAAATTTAAATACTCCGTTAAGTTGTCGGATTTTACCACTTTACAGCAATTAGCTGATGCTGCCGTCGACAGCGTTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAACTTCGGCGGTAAGACCCTAACCATCGACTGTAAAGCGAAGTTTATTGGCGACGGTAACCTTGTTTTCACACAACTTGGTAGAGGGTCCGTTGTAGTTGGTGCTTACATGGAGAGTGTCACAACGCCGTGGGTGATTAAACCGTGGACTGACGATAATCAGTGGATAACCGACCCCGCAGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCTACGGTAAACGATTACGCCAAGTTCCCGGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGACCAGAACATTTCGTCTGTTCTTGAGATACGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGACGGCGTAATTACCTTTGAAAACCTGAGCGGGGATTGGGGTAAAGGAAACTATGTCATTGGCGGGCGTACAAGTTACGGTTCGGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGGGTTATTGGGTTTACCTCATACCGTGCCGGCGAGAGCGGAGTTAAGACATGGCAGGGGACTGTAGGTTCCACAACGTCACGAAATTATAATCTTCAATTCCGCGATTCCGTAGTTTTGTACCCGGTATGGGACGGATTCGATTTAGGCGCAGATACCGACATGAACCCGGAAGCAGATAGGCCGGGGGATTACTCTGTATCTCAGTACCCAGTACATATGCTCCCGTTAAACCATTTGATTGATAACTTGTTGGTTAGAGGGTGTTTAGGAGTTGGCTTCGACATGGATGGGCAAGGGCTATACGTTTCTAACATAACCGTAGAAGATTGCGCTGGCAGTGGAGCATATCTGTTGACGCATGAAACAGTATTCACAAACATTGCGGTAATAGACACGAATACTAAAGACTTTCCTGCTAATCAGATTTACATTTCAGGGGCTTGCCGTGTTAATGGGCTGCGCTTGGTCGGCATCCGGTCAACTACCGAACAGGGCCTTACGATAGACGCGCCTAACTCCACTGTGAGCGGTATAACCGGCTTCGTAGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGGTTCTGCGGCGCTTCGGTTTCGTATCCATAAACTGTCAAAAACCCTTGATAGTGGGTCCGTGTACTCCCACATTAACGGCGGGCCAGGTTCTGGTTCGGCATGGACCGAAATTACCGCTATTTCGGGGTCCTTGCCTGATGCCGTGTCATTAAAAATAAACAGGGGAGATTATCGTGCTGTTGAGATACCGGTAGCGGTGTCCACCCTACCAGACAACGCTGTCAGGGATAACGGGGCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
159878fabc09f9f5ad947f28b009a70a3141e67f14d44dfcc26fe8f425cb6e13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50