Protein

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Genbank accession
YP_009791878.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALSVIVVPGDGVTTQFNIPFSLGYIKESDITARVGSEVDGAGNPSYRALTFLSPEIVEVAGTPTPVGQNIVFRRTVDREQLIVDFEDGDVINEENMNTAQRQAIMLVHEVLDGRFEQFQSSFDMGGFRITGVGDPVDPQDVATKNYIDTRISTGQASAAAAAASAAAALASQNAAAASATASAGSATASLNSATVSTNARDAAIAARDSALTYRNAAEGFRNQAATSATQAEASNVSAGNAATGAGASASAAASSASQSLTFRNQAETFRNEAALSETNAGSSAAAAAQRQTYAYQWAQQVEDTQVDDGMRVGYSAYHWAAKAAASAAAAQTWDPANYVAKAGSTMTGGLTAPNMTIAQTSSGSWGALQVRTAGASNYVNYGKRHDSHAGYIQVGDTVRWEFTTAGQISLPGGGILNPDGNLFIASLGWASDVIGRTSRMRMAGAAWADVRGTDGIRDSNLGGSVVVVGLTTNAVSGDNRSVVAMFYRQLQQTNIAGNWFTIPSL
Physico‐chemical
properties
protein length:506 AA
molecular weight: 52312,81280 Da
isoelectric point:4,86885
aromaticity:0,07312
hydropathy:-0,12925

Domains

Domains [InterPro]
DC_1510
STR
1–223
DC_1510 DC_1616
IPR005604
ATT
4–115
IPR005604
YP_009791878.1
1 506
Architecture
ATT
STR
RBD
ATT 1-115 | STR 116-223 | RBD 295-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Agrobacterium phage Atu_ph03
[NCBI] 		2024262 Uroviricota > Caudoviricetes > Autographivirales > Atuphduovirus > Atuphduovirus atuph03
Host Agrobacterium tumefaciens
[NCBI] 		358 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791878.1 [NCBI]
Genbank nucleotide accession
NC_047846.1 [NCBI]
CDS location
range 33371 -> 34891
strand +
CDS
ATGGCACTATCAGTGATCGTAGTTCCCGGTGATGGTGTTACTACGCAGTTTAACATCCCGTTTTCTTTGGGTTATATCAAGGAGAGCGATATCACGGCCCGCGTAGGGTCTGAGGTTGATGGTGCCGGTAATCCAAGCTACAGAGCTTTGACTTTCCTGTCGCCTGAGATTGTGGAAGTAGCTGGTACACCCACACCGGTTGGACAGAATATCGTGTTTCGACGTACAGTTGACCGCGAACAGTTGATCGTAGACTTCGAAGATGGCGACGTCATCAACGAGGAAAATATGAACACGGCACAGCGCCAAGCTATCATGCTCGTGCATGAAGTCTTGGACGGTCGTTTCGAGCAGTTCCAGTCTTCGTTTGACATGGGCGGCTTCCGTATTACCGGTGTCGGTGATCCCGTTGACCCACAGGACGTTGCTACGAAGAACTACATCGATACGCGCATTAGCACGGGTCAGGCGTCCGCTGCTGCCGCTGCTGCAAGTGCGGCTGCTGCATTGGCGTCTCAGAACGCTGCTGCGGCTTCGGCTACTGCTTCGGCAGGATCGGCTACCGCGTCGTTGAACTCTGCAACGGTATCGACCAACGCACGTGATGCTGCTATTGCTGCACGTGATTCGGCATTGACGTACCGCAATGCTGCCGAGGGCTTCCGTAATCAGGCAGCTACATCGGCAACACAGGCTGAAGCATCTAACGTCAGTGCAGGCAACGCTGCAACTGGTGCAGGTGCATCGGCTAGCGCTGCTGCGTCGAGTGCTTCGCAGTCGTTGACATTCAGGAACCAAGCAGAGACGTTTCGTAATGAGGCGGCCTTGTCGGAGACTAATGCTGGAAGTTCGGCTGCTGCCGCTGCTCAGAGGCAAACCTATGCCTACCAGTGGGCGCAGCAGGTAGAGGACACACAGGTCGATGATGGCATGCGTGTTGGATATTCGGCGTACCATTGGGCTGCAAAGGCTGCTGCAAGTGCTGCTGCTGCACAGACGTGGGACCCGGCGAACTACGTGGCTAAGGCAGGTAGCACGATGACCGGTGGTTTGACTGCGCCTAACATGACCATCGCCCAAACAAGCAGTGGTTCTTGGGGAGCTCTACAGGTCCGTACAGCGGGGGCGTCTAACTACGTGAATTACGGTAAGCGTCATGATAGTCATGCTGGCTATATTCAGGTGGGTGACACAGTCAGATGGGAGTTCACCACAGCCGGTCAGATCAGTCTACCGGGCGGAGGCATCCTCAACCCGGACGGTAACTTGTTCATAGCGTCTTTAGGTTGGGCATCTGATGTTATTGGGCGCACAAGCCGTATGCGAATGGCAGGCGCTGCGTGGGCAGACGTGCGGGGTACAGACGGTATTCGTGATAGTAATCTCGGCGGCTCTGTCGTTGTAGTGGGCCTAACCACGAACGCAGTTAGTGGTGATAACCGCTCTGTCGTGGCGATGTTCTATCGTCAGCTACAGCAGACCAACATTGCTGGTAACTGGTTTACCATCCCCTCACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
189ebe27adb527d5f6f722a83be2e05ba7c21e156a420fed729101444fa96970
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7433
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50