Protein

View in Explore
Genbank accession
ATS93408.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAQYEDKVVEVLVTLPEPSASTSGGSGAPFTGIETQDTVSTTLIGDGTQSSPLQANINISRRSGNRLQVVSTSSEQGLYVAGSDTKVSAKDGNTVTYISAQDAANAGNPALEGVYSDPVNVSTTSPKETLEIKADPTGKAKTQIDVIVDPDSMNALKVGTAGLSVPVSVAQDNTLEIRQGALYVRPQETKISQDPNNKIQVKSDGIYVDTVKGDKGDTGATGPAGAQGARGPEGPKGPAGIGINVIDQLDEVSQLPAVAEMELGDTYVIGQSFWTVVNENNVKQWKDIGNFAGPEGLSAYEVAEGAGFVGTVDEWLESLKGADGIGLQILGSFPDPSYLPDEGNKPGDCYIIQDMMYVWAGDEDGWQTVGQIGPEGKSAYQVWLANGHTGSQVDFLNSLIGPQGPKGDKGDKGDTGADGTNANAINLLGKVADEASLPAGADAGDAYLIGTNVWVSTGNDNWENLGAFQGPKGDQGDVGPAGPKGDKGDAGDVGKDNYALAVENGFQGSLSDYLASLKGAKGDTGPTGPRGLTGPQGAKGEVGEGLAILGSKADPSELPSNPVTGDAWLIGEDLYIFNGTAWENAGPVRGPKGDTGATGPAGAKGDKGDQGEKGDKGDKGDKGDPGDTGATGAGVIPKGTVTSAATLPPTGNTVGDYYVTEDTGTGYSWNGTTWVDLGVVRGPQGPQGDKGDTGDQGPQGVKGDTGATGPQGPQGDIGPGVEIMGKLNSTSELPSTGQLGQGYLIDGDFWGWTGSAYENLGRIQGPVGPTGPTGDPGPTGPQGVKGDKGDQGSLWIVFDHDPGPADGRVGDYFLNSSTLQFFRKTNATTWAPMGYMGGGNVYDAPKDGKQYTRIDGDWTELDVLEAPQDNGYYVRKDGAWVKLDRYDLRVIETTGEMDAAAGNCFKVDGTANKTMSLTGLPAGRAMTIVIRFLGKGAQLTWPANLSWSNGTAPALGTARTVVTLFWDGEFLTGTQAMTVD
Physico‐chemical
properties
protein length:980 AA
molecular weight: 100888,44330 Da
isoelectric point:4,31319
aromaticity:0,06837
hydropathy:-0,46663

Domains

Domains [InterPro]
DC_1512
ATT
1–89
DC_1512 DC_0915 G3DSA:1.20.5.320 IPR008160 G3DSA:6.20.230.10 G3DSA:6.20.230.10
IPR050149
Unmapped
212–804
IPR050149
G3DSA:1.20.5.320
STR
213–263
G3DSA:1.20.5.320 DC_1593
ATS93408.1
1 980
Architecture
ATT
ATT
STR
ATT
STR
ATT 1-89 | ATT 118-342 | STR 343-838 | ATT 839-885 | STR 886-980
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage DU_PP_I
[NCBI] 		2041488 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium sp.
[NCBI] 		1913084 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93408.1 [NCBI]
Genbank nucleotide accession
MF979560.1 [NCBI]
CDS location
range 7062 -> 10004
strand +
CDS
ATGGCACAATATGAAGATAAGGTCGTGGAAGTTCTGGTGACTCTCCCGGAACCGTCTGCGAGCACCTCTGGTGGTTCTGGTGCGCCTTTCACGGGCATCGAAACCCAAGACACCGTATCCACCACGCTGATTGGTGATGGTACTCAATCCTCCCCTCTGCAAGCAAACATCAACATCTCCCGTCGTTCAGGAAACCGCCTCCAAGTGGTGAGCACCTCCAGTGAGCAGGGTCTGTATGTTGCTGGCTCCGACACCAAGGTGTCTGCTAAGGATGGGAACACCGTAACTTACATCTCCGCCCAAGATGCTGCTAACGCTGGCAACCCGGCCCTGGAAGGTGTATACTCTGATCCGGTGAACGTGTCAACCACGTCACCGAAGGAGACTCTGGAAATCAAGGCTGATCCTACCGGGAAAGCCAAGACCCAAATCGACGTGATCGTTGATCCAGATTCCATGAACGCCCTGAAGGTAGGCACTGCTGGCCTGAGCGTTCCTGTTTCTGTGGCTCAAGACAACACGCTGGAAATCCGCCAGGGTGCTCTGTACGTTCGCCCGCAAGAGACTAAAATCTCCCAAGACCCAAACAACAAGATTCAAGTCAAGTCTGACGGGATTTACGTTGACACTGTAAAAGGTGATAAAGGGGATACCGGGGCAACTGGCCCGGCAGGGGCACAGGGTGCTCGTGGCCCAGAAGGTCCGAAAGGCCCGGCTGGTATTGGTATCAACGTCATCGATCAGCTTGACGAAGTTTCTCAGCTTCCGGCTGTTGCAGAAATGGAACTGGGTGACACTTACGTTATTGGACAGAGTTTCTGGACCGTTGTCAACGAAAACAACGTGAAGCAGTGGAAGGACATCGGTAACTTCGCGGGGCCTGAAGGTCTGTCTGCTTATGAAGTTGCAGAAGGAGCGGGCTTCGTTGGTACTGTTGATGAGTGGCTGGAATCCCTGAAAGGGGCTGACGGTATCGGTCTGCAAATTCTTGGTTCCTTCCCTGACCCGTCCTATCTGCCTGATGAAGGTAACAAGCCGGGTGACTGCTACATCATCCAAGACATGATGTATGTGTGGGCAGGTGATGAAGATGGATGGCAGACTGTAGGTCAGATTGGCCCAGAGGGTAAATCTGCGTACCAGGTATGGCTGGCTAACGGTCACACCGGATCTCAGGTTGACTTCCTGAACTCCCTGATTGGCCCACAAGGACCGAAAGGTGATAAAGGCGACAAAGGTGATACGGGTGCTGACGGTACTAACGCCAACGCCATCAACCTCTTGGGTAAAGTCGCAGACGAAGCGAGCCTCCCGGCGGGCGCGGATGCAGGCGATGCCTACCTGATCGGGACTAACGTTTGGGTATCCACTGGGAATGACAACTGGGAAAACCTCGGTGCCTTCCAAGGCCCTAAAGGTGATCAGGGGGATGTAGGCCCTGCTGGCCCAAAAGGCGACAAGGGAGACGCAGGTGACGTAGGCAAAGACAACTACGCATTGGCGGTAGAGAACGGGTTCCAAGGTTCCCTGAGCGACTACCTGGCATCTCTCAAAGGTGCGAAGGGCGACACAGGCCCGACTGGTCCACGTGGTCTTACTGGCCCGCAGGGTGCGAAAGGGGAAGTAGGGGAAGGTCTCGCGATCCTCGGATCAAAAGCTGATCCTTCAGAACTGCCTTCCAATCCGGTAACTGGTGACGCATGGCTGATCGGAGAAGACCTGTACATCTTCAACGGCACTGCTTGGGAGAATGCAGGCCCTGTCCGTGGTCCGAAAGGTGACACCGGAGCCACTGGCCCTGCTGGAGCTAAGGGTGACAAGGGTGACCAAGGCGAGAAAGGCGACAAGGGCGACAAAGGGGATAAAGGTGATCCGGGGGATACTGGTGCCACAGGCGCAGGTGTTATTCCGAAGGGAACTGTAACCTCTGCTGCGACCCTGCCTCCTACCGGGAACACCGTCGGTGATTACTACGTCACTGAGGACACTGGGACCGGATACTCTTGGAACGGGACAACCTGGGTTGACTTGGGAGTTGTGCGTGGACCGCAAGGACCGCAGGGCGACAAAGGTGATACCGGAGACCAAGGCCCACAAGGTGTGAAAGGTGACACTGGTGCTACAGGCCCTCAAGGCCCGCAAGGTGACATCGGCCCGGGCGTTGAGATCATGGGTAAACTCAACAGCACTTCAGAACTGCCTTCAACGGGGCAACTGGGTCAGGGTTACCTGATTGACGGCGACTTCTGGGGATGGACTGGCTCTGCCTACGAAAACCTCGGACGTATCCAAGGCCCGGTTGGTCCTACTGGTCCTACTGGTGACCCAGGCCCTACTGGTCCGCAGGGTGTCAAGGGTGATAAGGGTGATCAAGGTTCCTTGTGGATCGTGTTCGACCATGACCCGGGTCCTGCTGATGGTCGTGTAGGCGACTACTTCCTGAACTCCTCCACGTTGCAGTTCTTCCGCAAGACGAACGCAACCACTTGGGCACCGATGGGCTACATGGGTGGTGGTAACGTCTATGATGCACCGAAGGACGGCAAGCAGTACACCCGTATCGACGGAGACTGGACTGAACTCGATGTCTTGGAAGCGCCTCAAGACAACGGATACTACGTTCGTAAGGATGGTGCTTGGGTCAAACTGGATCGTTACGACCTGCGTGTCATCGAGACCACTGGTGAAATGGACGCCGCTGCCGGGAACTGCTTCAAAGTTGACGGTACTGCGAACAAAACCATGTCTCTGACTGGCCTGCCTGCCGGACGTGCGATGACCATCGTTATCCGCTTCCTCGGCAAAGGCGCTCAGTTGACATGGCCTGCGAACCTGTCATGGTCCAACGGCACTGCCCCGGCGCTCGGAACCGCTCGTACAGTGGTAACCCTGTTCTGGGACGGCGAGTTCCTGACTGGCACTCAGGCGATGACTGTTGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d371ada02da574f7d4cf4a933274d299b01cbf2c1c6b9f3f278008d683971e9f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6870
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage (DU_PP_I) infecting Pectobacterium spp. Park,T.-H. 2017-11-22 — GenBank