Protein

View in Explore
Genbank accession
YP_006986536.1 [GenBank]
Protein name
long tail fiber protein proximal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANNEFMALFGPDSFTANVFSEANAVKYRLVVRGTNNDSAVNSVEVSINGADIINRRTQAARGINLAVIDGTTLALLDYKAFDMYGDPATNGNAIKDYLNSLPANRIVCFYTFDAIKSDDDFLATMRKIGSVAWPETRFFNIPITTTNYSHRSSYSAIYSSTMKKICMENFVGGAGSLKDNTTSFVEVVFDEFSDIGVTGIPERMVDDVQTYQNSGDLYGFHAYGTWIVGSDVFLGDIFKFTGELYCSQELRDAGGEVYLYMWTENSIGQWTTSTILRTTGLAPDQWHSLSGYFTVPSDPVNTKMGSQVYHYPSTVKVGLAQCRNVQITKVPREEVNRNGAAIGVNGIRMQTISEVDDAGTQNPIDKLLSLPVSPTGVASDKKIISHNFAELDYIVSDPVEYTSTNTAEYQFKEWTATQQAAVTKASLSSYGLKAGDTIRMQCQMKRDVNAITNGKSAYITIQFWDANNTYISGINMRDVGTIPNVYSFYKNEGVIPAGAVTFDFGLYRYPDNTNIGTVSAKDVKLSIVR
Physico‐chemical
properties
protein length:530 AA
molecular weight: 58423,81150 Da
isoelectric point:5,03590
aromaticity:0,11132
hydropathy:-0,20094

Domains

Domains [InterPro]
DC_0004
STR
1–530
DC_0004
PS52031
LEC
24–205
PS52031
IPR039477
STR
62–132
IPR039477
YP_006986536.1
1 530
Architecture
STR
STR 1-530
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006986536.1
1 530
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,2862
Central domain 74 272 200 0,6126
C-terminal 273 530 257 0,5076
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-530

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP161
[NCBI] 		1141138 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus gap161
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006986536.1 [NCBI]
Genbank nucleotide accession
NC_019398 [NCBI]
CDS location
range 166846 -> 168438
strand +
CDS
ATGGCGAATAACGAATTTATGGCGTTATTCGGCCCTGATAGTTTCACGGCGAATGTGTTTTCAGAAGCAAACGCCGTGAAATATCGCCTTGTTGTCCGTGGAACGAATAACGATTCTGCGGTCAACTCGGTTGAGGTATCTATTAACGGGGCTGATATTATAAACAGACGAACACAAGCTGCTCGCGGAATTAACCTGGCTGTCATTGATGGAACAACTTTAGCATTATTGGATTACAAAGCATTCGATATGTATGGTGATCCTGCTACGAACGGGAATGCGATTAAAGACTACCTGAATTCACTTCCAGCGAACAGAATTGTGTGTTTTTATACTTTCGATGCTATCAAAAGTGACGATGACTTTTTAGCAACAATGAGGAAAATAGGTTCTGTTGCGTGGCCTGAAACTCGGTTCTTTAATATCCCGATCACCACAACCAATTATTCTCACCGTTCATCCTATTCAGCTATCTATTCATCTACGATGAAAAAGATTTGCATGGAAAACTTTGTCGGTGGTGCTGGTAGCCTGAAAGACAATACGACGAGTTTTGTTGAAGTTGTGTTTGATGAATTCAGTGATATCGGGGTAACTGGTATTCCAGAAAGAATGGTCGATGATGTCCAGACATACCAGAATAGCGGGGATCTTTATGGCTTCCACGCTTACGGGACGTGGATTGTTGGTAGTGATGTTTTTCTGGGCGATATCTTCAAATTCACGGGTGAACTATATTGTTCGCAAGAACTTCGTGATGCTGGCGGTGAAGTGTATCTGTATATGTGGACTGAAAACAGTATTGGACAATGGACCACATCAACCATTCTTAGAACAACTGGATTAGCCCCCGATCAGTGGCATTCATTATCAGGATATTTCACTGTTCCGTCAGATCCGGTAAACACCAAAATGGGTTCGCAGGTATATCATTATCCGTCTACCGTTAAAGTGGGGCTGGCGCAATGTCGCAACGTCCAGATCACAAAAGTACCTCGCGAAGAGGTGAACAGAAACGGGGCGGCAATTGGTGTCAATGGTATCAGGATGCAAACGATTTCCGAAGTCGATGATGCTGGAACCCAAAACCCGATTGATAAATTGCTTTCTCTACCCGTTTCGCCTACTGGTGTTGCAAGTGATAAGAAAATCATTTCGCATAACTTTGCTGAACTTGATTATATTGTTTCTGATCCGGTTGAATACACTTCGACAAATACAGCGGAGTACCAGTTCAAAGAATGGACTGCTACCCAGCAAGCGGCGGTAACGAAAGCATCACTAAGCAGTTATGGCTTAAAAGCTGGTGATACGATTCGTATGCAATGCCAAATGAAACGCGATGTGAACGCAATCACTAACGGTAAAAGCGCGTATATCACAATACAGTTCTGGGACGCGAATAATACGTATATCTCAGGAATCAACATGCGCGATGTTGGTACGATCCCTAACGTATATTCATTCTACAAAAACGAAGGGGTTATTCCTGCTGGTGCTGTTACGTTTGATTTCGGTTTATACCGTTATCCAGACAACACAAACATCGGTACGGTATCGGCTAAAGACGTTAAACTGTCAATCGTGAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b2595766075072804ac9839b83dfb6262ceb24d9b586d8fb4b5f2ca20057054
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50