Protein

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Genbank accession
XCO36505.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLNNLNQPKGSTIGVLKDGRTVQQAFDELFVSLNGVLVAPDWWVIQGTTNVELNGGVFLHGDARFQGKSSVVQLTSSTVAIVANSDGTFSPVTSYPTDGKPVVAHVREGSLAEVVGSLNRSAFIMGNDPITITWLPSELARITERFNIMSSYSPAGGVQFYTDYDITAYRAPSDSLTYHVDIVAGSDTSGDGSVDKPFQRIKKAIEQNPPARVIKIKGGPTPYTRDYTWNVSIVDRDVDIIGYGDQRPVLSGEAESVTFTPVEGRPGVYSATQGLAFRIVDKSVVDKYGHEQVLTNVASLAEVGPGRSFVSGSTITFQLNDSRAPDANVKLILQITNGRVQDNSNVYIENVEFRYSFRGFHAEVMDASKAGAVLRLNNCKFGLTCTENSFNSRGYNVVAVGCIAEYGMQDAWNYHSDVFGLGIKPWFIELNCIGRRSGFDMLPNNNGSTAHDGAVGIRMGGEYYETYGRVVHDVHEGTVTCNFNCTSRDSSREGNYLGGASFAAGQGGVAGKARVYLYNCRHGGPNAGITKDGESEIWLFTTPIGSKGQPQVISPYHFIT
Physico‐chemical
properties
protein length:560 AA
molecular weight: 60643,99970 Da
isoelectric point:5,71439
aromaticity:0,09821
hydropathy:-0,22268

Domains

Domains [InterPro]
DC_1231
ATT
1–206
DC_1231 DC_1219
IPR012334
STR
167–538
IPR012334
IPR011050
STR
172–532
IPR011050
XCO36505.1
1 560
Architecture
ATT
STR
ATT 1-206 | STR 207-550 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO36505.1
1 560
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9895
Central domain 197 549 354 0,9282
C-terminal 550 560 10 0,3463
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-549
C-terminal
550-560

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_066007
[NCBI] 		3232181 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO36505.1 [NCBI]
Genbank nucleotide accession
PP889451.1 [NCBI]
CDS location
range 38627 -> 40309
strand +
CDS
ATGTTAAACAACCTGAATCAGCCGAAAGGCTCAACAATTGGTGTGCTCAAGGATGGGCGCACCGTCCAACAAGCGTTTGATGAACTGTTTGTCTCACTTAACGGGGTCCTCGTGGCCCCTGACTGGTGGGTTATTCAGGGGACAACCAATGTAGAACTTAACGGAGGGGTGTTCTTGCACGGAGATGCCCGGTTTCAAGGGAAATCCTCGGTAGTACAATTAACATCGTCCACTGTAGCGATTGTTGCCAATAGTGACGGTACGTTCTCCCCTGTAACCTCATACCCAACGGATGGTAAACCAGTTGTTGCACACGTAAGGGAGGGCAGTCTGGCGGAAGTTGTTGGGAGCTTGAATAGGAGTGCATTTATCATGGGGAACGACCCAATAACTATCACGTGGTTACCGTCTGAGCTGGCCAGAATAACTGAGAGATTCAACATTATGAGTTCTTACAGTCCGGCTGGAGGTGTGCAGTTCTATACTGACTACGACATCACTGCCTACCGGGCACCGTCGGACTCTCTAACCTATCATGTGGACATTGTTGCTGGTAGCGATACGTCCGGGGATGGCTCCGTAGATAAACCATTCCAGCGCATAAAGAAAGCTATCGAGCAGAACCCGCCAGCTAGGGTCATCAAGATTAAAGGCGGCCCAACACCATACACTCGCGATTACACGTGGAACGTTTCCATCGTGGACCGGGACGTAGACATTATTGGGTACGGGGACCAGCGCCCGGTGTTATCCGGTGAGGCGGAGTCAGTCACGTTCACCCCAGTCGAAGGTAGACCCGGTGTTTACTCAGCCACTCAGGGCCTTGCATTCAGGATTGTCGATAAGAGTGTTGTCGATAAGTACGGCCATGAGCAGGTACTGACAAACGTCGCGTCTCTCGCTGAAGTAGGTCCGGGTCGTAGCTTCGTCAGCGGGTCGACCATAACGTTCCAACTGAACGACAGTCGAGCACCTGATGCTAACGTTAAGTTGATTCTCCAGATTACCAACGGGCGTGTGCAGGATAACTCCAATGTTTACATCGAGAACGTGGAGTTCCGCTACAGCTTCCGAGGGTTCCACGCTGAGGTTATGGATGCCAGTAAGGCAGGCGCCGTGCTCCGCTTGAACAACTGCAAGTTCGGGCTAACCTGTACTGAAAACTCATTCAACAGCAGGGGATACAACGTTGTTGCCGTTGGTTGTATTGCAGAGTACGGTATGCAGGATGCATGGAACTATCACTCGGACGTGTTCGGCCTAGGCATTAAGCCTTGGTTCATTGAGTTAAACTGTATCGGGAGACGCTCAGGGTTCGACATGCTCCCTAACAATAATGGCTCAACCGCACATGACGGCGCTGTAGGTATTCGAATGGGAGGTGAATACTACGAGACTTACGGCAGGGTGGTACACGATGTTCACGAGGGAACTGTAACATGCAACTTCAACTGTACGTCCCGCGATAGCTCACGTGAGGGTAACTACCTCGGAGGGGCATCATTTGCTGCTGGTCAGGGCGGTGTTGCAGGTAAGGCTCGGGTGTACCTGTACAACTGTCGACACGGTGGACCCAATGCTGGCATTACTAAGGATGGTGAATCTGAGATTTGGTTATTCACAACGCCAATTGGTTCGAAAGGCCAACCTCAGGTAATCAGTCCCTACCACTTCATAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0dcb5389caa64e42f8d70c2bafb5d256778f2012547286f69bed0fe2c6a084e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank