Protein

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Genbank accession
YP_009849663.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,63
Protein sequence
MCVLLGPPPLAGDPVGDYDAATKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIDDSVWLGDKFQRGKYSSGNGTTTFRVPDKNGVQEGSIRALYGRGDGGNSGANGQLFESAAPNITGFFTTYASQTYAQALGHTGGCFNANNNAFPDGRGDGIAPGSTALAGRYNTCEFNASISSPIYGASTDEILTRNFVGVWVIRASGGFVAANTSWSVINADKTTPIQVLLFLVVVLNLNINRPVQV
Physico‐chemical
properties
protein length:277 AA
molecular weight: 29534,57080 Da
isoelectric point:5,16777
aromaticity:0,10469
hydropathy:-0,16173

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VSe12
[NCBI] 		2847284 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus VSe12
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009849663.1 [NCBI]
Genbank nucleotide accession
NC_048794.1 [NCBI]
CDS location
range 82319 -> 83152
strand -
CDS
ATGTGCGTCCTATTGGGTCCACCCCCTCTTGCGGGGGACCCTGTTGGGGACTACGATGCTGCAACCAAACGTTGGGTAGAGAATAAGATTAACACTGGTACAGTTGGCCCCACTATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCATATATTCAACCATACGAAGTCGTTTCTGACGGACAGCTTCTTAATAGGGCTGACTGGCCTGAACTTTGGGCGTATGCACAAATGGTTGGGGCTATAGATGATTCAGTTTGGTTAGGAGATAAATTTCAGCGTGGTAAGTACTCATCAGGTAATGGAACAACAACCTTTCGTGTTCCAGATAAAAATGGGGTGCAGGAGGGATCAATACGTGCTCTTTATGGCCGTGGAGATGGTGGGAATAGTGGTGCAAATGGGCAACTGTTCGAATCCGCTGCGCCTAATATTACAGGTTTTTTCACCACATATGCCTCTCAAACCTATGCTCAGGCACTAGGACATACAGGTGGTTGCTTTAATGCAAACAATAATGCGTTTCCTGACGGAAGAGGTGACGGAATCGCTCCAGGGTCTACAGCTCTTGCTGGACGTTACAACACCTGTGAATTCAATGCTTCAATTTCAAGTCCAATTTACGGCGCATCCACTGATGAAATCCTTACACGAAACTTTGTCGGCGTCTGGGTAATCCGTGCTTCTGGTGGGTTCGTGGCAGCAAATACATCATGGAGTGTTATTAACGCTGATAAAACAACCCCGATTCAGGTGTTGTTGTTTCTGGTGGTAGTGTTAAATCTGAATATAAATCGCCCAGTGCAAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e1ffeaa1fd8ecb0f77b4a18e32433071acb3095b8a3a1a132b91468954bc79d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella bacteriophage VSe12 Denisenko,E., Volozhantsev,N., Kislichkina,A., Verevkin,V., Myakinina,V. and Krasilnikova,V. 2018-05-24 — GenBank