Protein

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Genbank accession
QHB43444.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,83
Protein sequence
MLKLADIKFPITFQSRGVGHFMYSDKNTCTKFNEYGKPDVSTMEIEHFIDAHNKHYNSIHDYGYAMPGYTCLHYKPYKGQVLPVRSTERSEIHTVEMKTCDYKKLWCLSVDNIKYPITFYTVGNSTIRFTSRDNGVYSDGQKSELKVDFFVNGHNKFNPHNEKDKVYYVEDITKHLFGDAPIGGGKSYFAQAIDNAARRIGEQIHSQTIKASGGWRIDKSAFAHQEIVTHGAIEDMPLAATLKGVQIADGTWFELTAKPKTIEIHDDVVILLLHYGSAKNRTVAGEISIKRGTMVKWKVKV
Physico‐chemical
properties
protein length:301 AA
molecular weight: 34181,52300 Da
isoelectric point:8,77661
aromaticity:0,11296
hydropathy:-0,45316

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHB43444.1
1 301
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0042
Central domain 11 205 196 0,0941
C-terminal 206 301 95 0,9887
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-301

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFP17
[NCBI] 		2692510 Uroviricota > Caudoviricetes > Drexlerviridae > Hanrivervirus > Hanrivervirus SFP17
Host Shigella flexneri
[NCBI] 		623 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHB43444.1 [NCBI]
Genbank nucleotide accession
MN432485 [NCBI]
CDS location
range 44974 -> 45879
strand -
CDS
ATGTTAAAATTAGCTGACATTAAATTCCCGATCACCTTCCAATCTCGCGGCGTTGGTCACTTCATGTATTCCGACAAAAATACATGCACTAAGTTTAACGAATACGGAAAGCCTGATGTTTCAACTATGGAGATTGAGCACTTCATTGATGCGCACAATAAGCACTACAACTCAATACATGACTACGGCTACGCAATGCCAGGCTACACATGTTTGCACTATAAGCCATATAAAGGCCAAGTGTTACCAGTGCGCTCAACTGAGCGATCAGAGATTCATACGGTCGAGATGAAAACCTGCGACTACAAAAAGCTGTGGTGCTTAAGTGTGGACAATATCAAGTATCCGATCACGTTCTACACGGTTGGTAATTCAACGATTCGCTTCACATCGCGCGACAATGGCGTTTATAGCGATGGTCAGAAATCGGAGTTGAAAGTTGATTTCTTTGTCAATGGTCACAACAAATTCAATCCGCACAACGAAAAGGATAAAGTGTATTACGTGGAAGATATTACGAAACACTTGTTTGGAGATGCGCCAATTGGCGGAGGTAAATCATATTTTGCGCAGGCGATAGATAACGCCGCTCGACGTATTGGTGAGCAGATTCACAGTCAAACAATTAAGGCGTCCGGAGGATGGCGTATTGATAAGAGCGCCTTTGCCCATCAAGAAATCGTAACTCATGGCGCAATTGAAGACATGCCGCTTGCCGCCACGCTAAAAGGCGTCCAAATTGCGGATGGCACATGGTTTGAATTAACGGCAAAGCCAAAGACGATCGAGATTCATGATGACGTTGTTATTCTTCTGCTTCATTATGGCAGTGCGAAAAACCGGACTGTTGCAGGAGAGATCAGCATCAAGCGCGGAACGATGGTTAAGTGGAAGGTTAAAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cbc088b9b276c3d0fd503df0eb6aebcf8b42fde286057a1b947822e2fbc9aa72
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Characterization of a Novel Bacteriophage SFP17 Infecting Shigella flexneri Lee,J.-H. and Lee,J.-S. 2016-12-30 — GenBank