Protein

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Genbank accession
YP_009790734.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MTQRLKFNFPWAQDGEVKDPDLDTSAPSFIENRYADVGWEVEKPPNEWQNFLSQISDLKIISLLFSGVAEFDSSVTYQVGAVSSLDGVVRVYTSTGWEEVLNLKKVDYLNDISNLKSIYDNHLAATNPHKDTVDTVVNKTYSKSTIDDAFGSKTDPRTIVYHKLQTGRVHQETPQQLGTLPTSGGKFSGPVSLIGGMKFGTNISIRMNPGNGRIEMRAGNRILSIDALGNVLWSIVGGEEYPVMTELNYSEFQIRWGNRFALPQPYLDMNMKTSINDAMSVRGWTISTSDAPVFHPKGGIKVDDNTITFEGFDVNCPTSIVMYGRNAGGNLITARSIKAPSAGYTSMETLLTNMGFTSAVWVERITCYPTLTAYQQSMLVRP
Physico‐chemical
properties
protein length:382 AA
molecular weight: 42334,31010 Da
isoelectric point:5,48771
aromaticity:0,09686
hydropathy:-0,28770

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790734.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 238 238 0,8370
Central domain 239 371 134 0,4206
C-terminal 372 382 10 0,9848
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-238
Central
239-371
C-terminal
372-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ST32
[NCBI] 		2005048 Uroviricota > Caudoviricetes > Chaseviridae > Carltongylesvirus > Carltongylesvirus ST32
Host Escherichia coli H21
[NCBI] 		3060862 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790734.1 [NCBI]
Genbank nucleotide accession
NC_047830.1 [NCBI]
CDS location
range 47471 -> 48619
strand +
CDS
ATGACACAACGTCTTAAGTTTAATTTTCCCTGGGCGCAAGATGGTGAAGTTAAAGACCCGGACTTGGACACCTCTGCACCAAGTTTTATTGAAAACAGATATGCCGACGTAGGTTGGGAAGTTGAGAAGCCACCTAACGAGTGGCAAAACTTCTTGTCGCAGATTAGTGACTTGAAGATTATCTCGCTCTTGTTTAGTGGTGTCGCTGAGTTTGATTCCAGTGTGACCTATCAGGTTGGTGCAGTTTCATCGCTCGATGGTGTTGTTCGTGTCTACACTTCCACAGGTTGGGAAGAGGTACTTAACCTCAAGAAGGTTGATTACCTTAATGACATTAGCAACTTGAAGTCTATCTACGATAACCACTTGGCTGCAACCAACCCCCACAAGGATACTGTAGACACTGTAGTTAACAAGACTTACAGCAAGTCTACCATTGATGATGCCTTTGGGAGTAAAACAGACCCAAGAACCATTGTATACCACAAGCTGCAAACTGGCCGTGTTCACCAAGAAACTCCTCAACAGCTTGGGACACTTCCAACATCTGGTGGTAAGTTCTCTGGCCCTGTGTCACTCATAGGTGGAATGAAGTTTGGAACAAACATCTCAATCCGAATGAACCCAGGAAATGGCAGAATTGAGATGCGTGCTGGAAACAGGATTCTATCCATTGATGCACTTGGCAATGTTCTGTGGAGCATAGTTGGTGGTGAGGAATATCCAGTGATGACTGAACTGAATTATTCAGAATTTCAGATTCGCTGGGGAAACAGGTTCGCACTTCCTCAACCATACCTTGACATGAACATGAAAACATCTATCAACGATGCCATGTCAGTTCGTGGGTGGACTATTAGTACGTCGGATGCCCCGGTATTTCATCCCAAGGGTGGGATTAAAGTTGATGACAACACAATAACCTTTGAAGGTTTTGATGTTAACTGCCCAACGTCAATCGTCATGTATGGAAGAAATGCTGGTGGAAATCTTATCACAGCAAGGTCCATAAAGGCTCCGTCTGCTGGGTACACTTCAATGGAAACCCTGCTGACAAACATGGGATTCACCTCTGCTGTTTGGGTCGAGAGAATTACCTGTTACCCAACTCTTACCGCATATCAACAATCAATGTTAGTGAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e7dd6124ec98ad97c027894eff2ac244114d9c80a94793bc349af1e5f61e5f58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6190
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
ST32 complete genome sequence Liu,X. and Liu,H. 2008-06-28 — GenBank